GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002347-TA|BGIBMGA002347-PA|undefined
         (149 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        23   4.1  
DQ974160-1|ABJ52800.1|  235|Anopheles gambiae serpin 1 protein.        23   4.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   9.5  

>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 102 EKNTLALHVVSPEVLNYHGYSFEP 125
           EK TLA      +++N  GY  EP
Sbjct: 363 EKGTLAFAATEIQLVNKFGYDGEP 386


>DQ974160-1|ABJ52800.1|  235|Anopheles gambiae serpin 1 protein.
          Length = 235

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 102 EKNTLALHVVSPEVLNYHGYSFEP 125
           EK TLA      +++N  GY  EP
Sbjct: 177 EKGTLAFAATEIQLVNKFGYDGEP 200


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 6/25 (24%), Positives = 16/25 (64%)

Query: 2   YTDTDDISDRESEYEERSPEDSPKV 26
           + +TDD+    S+++  +PE+  ++
Sbjct: 419 WPETDDVDSGASDFDRVTPEELQEI 443


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.131    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,108
Number of Sequences: 2123
Number of extensions: 4916
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 3
length of query: 149
length of database: 516,269
effective HSP length: 59
effective length of query: 90
effective length of database: 391,012
effective search space: 35191080
effective search space used: 35191080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)