GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002347-TA|BGIBMGA002347-PA|undefined
         (149 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M32886-1|AAA60588.1|  198|Homo sapiens SRI protein.                    29   6.4  
L12387-1|AAA92155.1|  198|Homo sapiens sorcin protein.                 29   6.4  
BC011025-1|AAH11025.1|  198|Homo sapiens sorcin protein.               29   6.4  

>M32886-1|AAA60588.1|  198|Homo sapiens SRI protein.
          Length = 198

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 17  ERSPEDSPKVTKKSLSTVGFRSSPENLNN 45
           +RS    P+  +K+L+T+GFR SP+ +N+
Sbjct: 115 DRSGTVDPQELQKALTTMGFRLSPQAVNS 143


>L12387-1|AAA92155.1|  198|Homo sapiens sorcin protein.
          Length = 198

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 17  ERSPEDSPKVTKKSLSTVGFRSSPENLNN 45
           +RS    P+  +K+L+T+GFR SP+ +N+
Sbjct: 115 DRSGTVDPQELQKALTTMGFRLSPQAVNS 143


>BC011025-1|AAH11025.1|  198|Homo sapiens sorcin protein.
          Length = 198

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 17  ERSPEDSPKVTKKSLSTVGFRSSPENLNN 45
           +RS    P+  +K+L+T+GFR SP+ +N+
Sbjct: 115 DRSGTVDPQELQKALTTMGFRLSPQAVNS 143


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.131    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,967,581
Number of Sequences: 224733
Number of extensions: 751222
Number of successful extensions: 2229
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2226
Number of HSP's gapped (non-prelim): 3
length of query: 149
length of database: 73,234,838
effective HSP length: 83
effective length of query: 66
effective length of database: 54,581,999
effective search space: 3602411934
effective search space used: 3602411934
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)