GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002347-TA|BGIBMGA002347-PA|undefined
         (149 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119589-1|AAM50243.1|  852|Drosophila melanogaster LD15947p pro...    29   3.4  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   3.4  
AE014297-2365|AAF55429.2|  852|Drosophila melanogaster CG5824-PA...    29   3.4  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   3.4  
AY119204-1|AAM51064.1|  215|Drosophila melanogaster SD14156p pro...    28   4.5  
AY060809-1|AAL28357.1| 1272|Drosophila melanogaster GH27809p pro...    28   4.5  
AE013599-3941|AAF47260.2| 1272|Drosophila melanogaster CG30421-P...    28   4.5  
AY069504-1|AAL39649.1|  861|Drosophila melanogaster LD22651p pro...    27   7.9  
AE014134-1340|AAF52557.1|  861|Drosophila melanogaster CG7154-PA...    27   7.9  

>AY119589-1|AAM50243.1|  852|Drosophila melanogaster LD15947p
           protein.
          Length = 852

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 3   TDTDDISDRESEYEERSPEDSPKVTKK 29
           ++ D++SD +    E  PE++PK +KK
Sbjct: 377 SEVDNLSDLKESESESEPEEAPKASKK 403


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 3     TDTDDISDRESEYEERSPEDSPKVTKKSLS 32
             ++T  I ++  E  E +PE++PKV +K ++
Sbjct: 13514 SETQSIEEKPIEVAEEAPEETPKVVEKKVA 13543


>AE014297-2365|AAF55429.2|  852|Drosophila melanogaster CG5824-PA
           protein.
          Length = 852

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 3   TDTDDISDRESEYEERSPEDSPKVTKK 29
           ++ D++SD +    E  PE++PK +KK
Sbjct: 377 SEVDNLSDLKESESESEPEEAPKASKK 403


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 3     TDTDDISDRESEYEERSPEDSPKVTKKSLS 32
             ++T  I ++  E  E +PE++PKV +K ++
Sbjct: 15373 SETQSIEEKPIEVAEEAPEETPKVVEKKVA 15402


>AY119204-1|AAM51064.1|  215|Drosophila melanogaster SD14156p
          protein.
          Length = 215

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 3  TDTDDISDRESEYEERSPEDSPKVTKKSLSTVGFRSSPENLNNKPMALRATQS-FTGAIE 61
          ++  D+S+  +E +      S   +  S S++  RSSP +L+    A    QS F G + 
Sbjct: 24 SEAPDVSELTAESKTNGHVSSSSSSSSSESSLSSRSSPRSLSTSVTAASTLQSKFNGHMS 83

Query: 62 ELKANFQIN 70
             A F  N
Sbjct: 84 AAPALFNGN 92


>AY060809-1|AAL28357.1| 1272|Drosophila melanogaster GH27809p protein.
          Length = 1272

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 3    TDTDDISDRESEYEERSPEDSPKVTKKSLSTVGFRSSPENLNNKPMALRATQS-FTGAIE 61
            ++  D+S+  +E +      S   +  S S++  RSSP +L+    A    QS F G + 
Sbjct: 1081 SEAPDVSELTAESKTNGHVSSSSSSSSSESSLSSRSSPRSLSTSVTAASTLQSKFNGHMS 1140

Query: 62   ELKANFQIN 70
               A F  N
Sbjct: 1141 AAPALFNGN 1149


>AE013599-3941|AAF47260.2| 1272|Drosophila melanogaster CG30421-PA
            protein.
          Length = 1272

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 3    TDTDDISDRESEYEERSPEDSPKVTKKSLSTVGFRSSPENLNNKPMALRATQS-FTGAIE 61
            ++  D+S+  +E +      S   +  S S++  RSSP +L+    A    QS F G + 
Sbjct: 1081 SEAPDVSELTAESKTNGHVSSSSSSSSSESSLSSRSSPRSLSTSVTAASTLQSKFNGHMS 1140

Query: 62   ELKANFQIN 70
               A F  N
Sbjct: 1141 AAPALFNGN 1149


>AY069504-1|AAL39649.1|  861|Drosophila melanogaster LD22651p
          protein.
          Length = 861

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 9  SDRESEYEERSPEDSPKVTKKSLS---TVGFRSSPENLNNKPM 48
          S+R  +YEE S    P   ++ L     VG  ++PE   N PM
Sbjct: 12 SERREKYEEYSQHQDPAQLQRGLKLILKVGSNATPEYSANSPM 54


>AE014134-1340|AAF52557.1|  861|Drosophila melanogaster CG7154-PA
          protein.
          Length = 861

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 9  SDRESEYEERSPEDSPKVTKKSLS---TVGFRSSPENLNNKPM 48
          S+R  +YEE S    P   ++ L     VG  ++PE   N PM
Sbjct: 12 SERREKYEEYSQHQDPAQLQRGLKLILKVGSNATPEYSANSPM 54


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.131    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,162,676
Number of Sequences: 52641
Number of extensions: 263334
Number of successful extensions: 1036
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1030
Number of HSP's gapped (non-prelim): 11
length of query: 149
length of database: 24,830,863
effective HSP length: 79
effective length of query: 70
effective length of database: 20,672,224
effective search space: 1447055680
effective search space used: 1447055680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)