Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002346-TA|BGIBMGA002346-PA|IPR006140|D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding, IPR006139|D-isomer specific
2-hydroxyacid dehydrogenase, catalytic region
(487 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076... 127 2e-29
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 126 5e-29
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 122 5e-28
03_01_0183 - 1474202-1474276,1474511-1474627,1474791-1474847,147... 116 3e-26
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 115 1e-25
04_01_0035 - 433848-434372,434905-435381 107 3e-23
04_01_0038 + 446314-446787,446829-447350 105 6e-23
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 104 1e-22
04_01_0033 + 391565-391974,393484-393520,394959-395483 100 2e-21
04_01_0036 + 436592-437572 97 4e-20
06_03_0086 + 16458881-16458952,16461795-16461966,16462621-164628... 96 6e-20
06_03_0085 + 16431503-16431568,16431981-16432152,16432402-164324... 96 6e-20
02_01_0012 - 80014-80104,80190-80308,80480-80524,80726-80911,810... 87 4e-17
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938... 50 3e-06
04_01_0037 + 444239-444667,444817-444825 38 0.018
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 35 0.17
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 34 0.22
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 32 1.2
03_05_0124 + 21034963-21035181,21035618-21037466,21037485-210381... 30 4.8
11_06_0432 + 23448482-23448570,23448987-23449100,23449514-234495... 29 6.3
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 29 8.3
09_04_0030 + 13940168-13940250,13940703-13941714 29 8.3
09_04_0029 - 13932414-13933416,13933821-13933903 29 8.3
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 29 8.3
01_01_0145 + 1327172-1327362,1327491-1328169 29 8.3
>10_08_0736 +
20205934-20206551,20207258-20207426,20207562-20207692,
20208100-20208144,20208145-20208939,20209081-20209128,
20209504-20209620,20210087-20210161
Length = 665
Score = 127 bits (306), Expect = 2e-29
Identities = 104/343 (30%), Positives = 154/343 (44%), Gaps = 32/343 (9%)
Query: 29 PLVALLDG-RDCTVEMPILKDVATVAFCDAQSTSEIHEKVLNEAVGALMWHTIILTKEDL 87
PLV L+ D ++E +L A V + S + A L+ L +
Sbjct: 26 PLVVTLNCLEDPSMEQEVLAGAAAVEHAPLSALSSGR---VEAAAAVLLTSLAFLPRAAQ 82
Query: 88 EKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYWL 147
+ + ++I+ +GS D A ELG+ + +V EEVADT M L L L RRT+ L
Sbjct: 83 RRLRPWQLILCLGSPDRAADAAVAAELGLRLVHVDANRAEEVADTVMALFLGLLRRTHLL 142
Query: 148 ANMVREGKKFTGPE-----QVREASAGCARIRGDTLGIVGLGRIGSAVALRAKAFGFNVI 202
+ R ++ P V+ G R RG LGIVG+ +A R+ AF +V+
Sbjct: 143 S---RHASSYSAPPAGWLGSVQPLCRGMRRCRGLVLGIVGVNAAARCLATRSLAFSMSVL 199
Query: 203 FYDP-YLPDGIEKSLGLT------RVYTLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQ 255
++DP + +G K + R+ TL DLL SD VSLHC+L H++N ++
Sbjct: 200 YFDPLHEANGKTKRPSILFPSAARRMDTLNDLLTASDLVSLHCALTNDTTHILNAERLQH 259
Query: 256 MRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAALDVHENEPFNVFQAYLNGHRPXXXXX 315
++PGAF+VNT L+DD L L G I ALD E ++ R
Sbjct: 260 IKPGAFIVNTGSCQLIDDCALKQLLIDGTIAGCALDGAEG------PQWMEAWRMINVID 313
Query: 316 XXXXXXCSVLLQQGPLKDAPNLLCTPHAAFYSDASAQELREMA 358
V ++ PN+L P +A YS+ E+RE A
Sbjct: 314 YTFTAHSQV-------REMPNVLILPRSADYSEEVWIEIREKA 349
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 126 bits (303), Expect = 5e-29
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 9/286 (3%)
Query: 18 GPIANGPLQSRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTSEIHEKVLNEAVGALMW 77
G +G L +P V + + + + +L+ A V S +E+ KV +
Sbjct: 67 GAGTDGALWPKPAVLVAE-KLSEAGLAVLRGFADVECAYGMSPAELLAKVAQFDALIVRS 125
Query: 78 HTIILTKEDLEKFKA-LRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCL 136
T + T+E LE + LR++ R G G+DN+D++AA E G V N P A+ + L
Sbjct: 126 GTKV-TREVLEAGRGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEHGIAL 184
Query: 137 ILNLYRRTYWL-----ANMVREGKKFTGPEQVREASAGCARIRGDTLGIVGLGRIGSAVA 191
+ ++ R A R FT + + + G TL ++G G++GS VA
Sbjct: 185 LASMARNVSQADAALKAVYSRTLTVFTAQGKWQRTKYVGVSLVGKTLAVMGFGKVGSEVA 244
Query: 192 LRAKAFGFNVIFYDPYLPDGIEKSLGLTRVYTLQDLLFQSDCVSLHCSLNEHNHHLINEF 251
RAK G +VI +DPY P +++G V + + + ++D +SLH L + N+
Sbjct: 245 RRAKGLGMHVIAHDPYAPADRARAIGAELV-SFDEAIGRADFISLHMPLTPATSKVFNDE 303
Query: 252 TIKQMRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAALDVHENEP 297
+ +M+ G ++N ARGG++D++ L AL G++ AALDV EP
Sbjct: 304 SFSRMKNGVRIINVARGGVIDEDALVRALDSGKVAQAALDVFTEEP 349
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 122 bits (295), Expect = 5e-28
Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 93 LRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYWLANMVR 152
LR++ R G G+DN+D+ AA E G V N P A+ + L+ + R N+ +
Sbjct: 135 LRVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMSR------NIAQ 188
Query: 153 EGKKFTGPEQVREASAGCARIRGDTLGIVGLGRIGSAVALRAKAFGFNVIFYDPYLPDGI 212
+ R G + + G T+ I+G G++GS VA RAK G +VI +DPY
Sbjct: 189 ADASLKAGKWQRNKYVGVSLV-GKTIAILGFGKVGSEVARRAKGLGMHVIAHDPYASADR 247
Query: 213 EKSLGLTRVYTLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVD 272
++G+ V +++D L +D +SLH L + ++N+ T +M+ G ++N ARGG++D
Sbjct: 248 AHAIGVELV-SMEDALTTADFISLHMPLTPATNKMLNDETFAKMKKGVRIINVARGGVID 306
Query: 273 DEGLAAALKQGRIRAAALDVHENEP 297
++ L AL G + AALDV EP
Sbjct: 307 EDALVRALDSGIVAQAALDVFTKEP 331
>03_01_0183 -
1474202-1474276,1474511-1474627,1474791-1474847,
1475149-1475196,1475313-1476101,1476516-1476646,
1476769-1476937,1477954-1478541
Length = 657
Score = 116 bits (280), Expect = 3e-26
Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 14/286 (4%)
Query: 17 RGPIANGPLQSRPLVALLDGRDCTVEMPILKD-VATVAFCDAQSTSEIHEKVLNEAVGAL 75
R + G +PLV L+ C + + ++ +A VA + S + + A L
Sbjct: 3 RSAASGGGGGGQPLVVSLN---CLDDPSLEQEGLAGVAGVEHVPLSAVASGRVEAAAAVL 59
Query: 76 MWHTIILTKEDLEKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMC 135
+ L + + + ++++ +GS D A ELG+ + +V EEVADT M
Sbjct: 60 LPSLAFLPRAAQRRLRPWQLLLCLGSPDRAADAALAAELGLRLVHVDANRAEEVADTVMA 119
Query: 136 LILNLYRRTYWLANMVREGKKFTGPE---QVREASAGCARIRGDTLGIVGLGRIGSAVAL 192
L L L RRT+ L+ V+ G R RG LGI+G +A
Sbjct: 120 LFLGLLRRTHLLSRHASSAPAAVAAGWLGSVQPMCRGMRRCRGLVLGIIGRSAAARCLAT 179
Query: 193 RAKAFGFNVIFYDP-YLPDGIEKSLGLT------RVYTLQDLLFQSDCVSLHCSLNEHNH 245
R+ AF +V+++DP + +G K + R+ TL DLL SD VSLHC+L
Sbjct: 180 RSLAFRMDVLYFDPRHSANGKAKRPSIVFPSAARRMDTLNDLLAASDLVSLHCTLTNDTM 239
Query: 246 HLINEFTIKQMRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAALD 291
H++N ++ ++PGAF+VNT L+DD L L G I ALD
Sbjct: 240 HILNADCLQHVKPGAFIVNTGSCQLIDDCALKQLLIDGTIAGCALD 285
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 115 bits (276), Expect = 1e-25
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 14/282 (4%)
Query: 11 ARMDSMRGPIANGPLQSRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTSEIHEKVLNE 70
A S RG +A RP V L+ + + +L+ A V + E+ KV
Sbjct: 55 AAAPSARG-VAAEAAAGRPTV-LVTEKLGDAGLELLRRFANVDCAYELTAEELRAKV--S 110
Query: 71 AVGALMWHTII-LTKEDLEKFKA-LRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEE 128
V AL+ + +T+E E + LR++ R G G+DN+D++AA E G V N P
Sbjct: 111 LVDALVVRSATRVTREVFEAARGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVA 170
Query: 129 VADTTMCLILNLYRRTYWLANMVREGKKFTGPEQVREASAGCARIRGDTLGIVGLGRIGS 188
A+ + L+ + R ++ GK R G + + G TL I+G G++GS
Sbjct: 171 AAEHAIALLAAMARNVAQADASLKAGK------WQRNKYVGVSLV-GKTLAIMGFGKVGS 223
Query: 189 AVALRAKAFGFNVIFYDPYLPDGIEKSLGLTRVYTLQDLLFQSDCVSLHCSLNEHNHHLI 248
VA RAK G ++I +DPY P +++G+ V + + + +D +SLH L L
Sbjct: 224 EVARRAKGLGMDIISHDPYAPVDRARAIGVDLV-SFDEAISTADFISLHMPLTPSTAKLF 282
Query: 249 NEFTIKQMRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAAL 290
++ T M+ G ++N ARGG+VD++ L AL G + L
Sbjct: 283 DDETFANMKKGVRIINVARGGVVDEDALLRALDNGTVSQCVL 324
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 107 bits (256), Expect = 3e-23
Identities = 70/211 (33%), Positives = 109/211 (51%), Gaps = 9/211 (4%)
Query: 87 LEKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYW 146
L+ +L +V G+GVD+ID+ G+AV +VAD + L++++ RR
Sbjct: 79 LDAVPSLGCVVTTGAGVDHIDLAECARRGVAVAGAGTVFSTDVADHAVGLLVDVLRRISA 138
Query: 147 LANMVREGKKFTGPEQVREASAGCARIRGDTLGIVGLGRIGSAVALRAKAFGFNVIFYDP 206
VR G + G +++ G +GI+GLG IGS +A R +AFG I Y+
Sbjct: 139 SDRYVRRGLWAARGDY----PLG-SKLSGKHVGIIGLGSIGSLIAKRLQAFGCT-ISYNS 192
Query: 207 YLPDGIEKSLGLTRVYTLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQMRPGAFLVNTA 266
P + S+ + DL SD + + C+LN+ H+++ ++ + +VN A
Sbjct: 193 RRP---KDSVSYNYFPDVTDLAAASDVLIVACALNDETRHIVDSSVLEALGKDGVVVNIA 249
Query: 267 RGGLVDDEGLAAALKQGRIRAAALDVHENEP 297
RGG+VD+ L ALK+GRI A LDV E EP
Sbjct: 250 RGGIVDEAELIRALKEGRIAGAGLDVFEKEP 280
>04_01_0038 + 446314-446787,446829-447350
Length = 331
Score = 105 bits (253), Expect = 6e-23
Identities = 86/290 (29%), Positives = 128/290 (44%), Gaps = 19/290 (6%)
Query: 16 MRGPIANGPLQSRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTSEIHEKVLNEAVGAL 75
M P S+P+V L D E + + DA + + L L
Sbjct: 1 MAPPATQDGSSSKPIVLLADPLIPEFEQELAPSYRLLPAADADEAAAASARAL------L 54
Query: 76 MWHTIILTKEDLEKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMC 135
+T ++ AL ++V +GVD+I++ A GIAV N + AD +
Sbjct: 55 TVDLPAVTAAQIDALPALELVVASSAGVDHINLGACRRRGIAVTNAQNAFSADAADYAVG 114
Query: 136 LILNLYRRTYWLANMVREGKKFTGPEQVREASAGCA-------RIRGDTLGIVGLGRIGS 188
L++ + RR VR G AS A + G +GIVGLG IG
Sbjct: 115 LLVAVLRRVAAADAYVRRGAWAAAAGDYPLASKVLADLGGKKIEVSGKRVGIVGLGSIGG 174
Query: 189 AVALRAKAFGFNVIFYDPYLPDGIEKSLGLTRVY-TLQDLLFQSDCVSLHCSLNEHNHHL 247
VA R AFG VI Y+ P K+ + Y ++++L +SD + L C+L E +
Sbjct: 175 LVARRLAAFGC-VIAYNSRSP----KASAPYKFYPSVRELAAESDVLVLSCALTEETRRM 229
Query: 248 INEFTIKQMRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAALDVHENEP 297
+ ++ + G LVN RGGLVD+ L L++G + A LDV+ENEP
Sbjct: 230 VGREVMEALGKGGVLVNVGRGGLVDEAELVRCLREGVLGGAGLDVYENEP 279
>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
Length = 454
Score = 104 bits (250), Expect = 1e-22
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 87 LEKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYW 146
++ +L I+ G+D +D+ A G+ V N P ++VAD + L + R+
Sbjct: 64 IDALPSLEIVSSFSVGIDRVDLDACLRRGVRVTNTPDVLTDDVADLAVGLAIAALRKIPQ 123
Query: 147 LANMVREGK-KFTGPEQVREASAGCARIRGDTLGIVGLGRIGSAVALRAKAFGFNVIFYD 205
VR GK K G + R G +GI+GLGRIG AVA RA+AF + ++
Sbjct: 124 ADRYVRAGKWKSKGDFTLT------TRFSGKRVGILGLGRIGLAVAKRAEAFDCPISYHS 177
Query: 206 PYLPDGIEKSLGLTRVY-TLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQMRPGAFLVN 264
EK + Y + DL D + + CSLN H++N I + P L+N
Sbjct: 178 RS-----EKPFPKYKFYPNVVDLAANCDVLVVACSLNPETRHIVNRKVIDALGPEGVLIN 232
Query: 265 TARGGLVDDEGLAAALKQGRIRAAALDVHENEPF 298
ARG VD+ L +AL + R+ A LDV E+EPF
Sbjct: 233 IARGAHVDEPELISALLEKRLGGAGLDVFEDEPF 266
Score = 90.6 bits (215), Expect = 2e-18
Identities = 53/131 (40%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 175 GDTLGIVGLGRIGSAVALRAKAFGFNVIFYDPYLPDGIEKSLGLTRVYTLQDLLFQSDCV 234
G +GI+GLGRIG AVA R +AF V +Y D G T ++ +L SD +
Sbjct: 285 GKRVGIIGLGRIGLAVAKRVEAFDCPVNYYQRTKQD----HPGYTYYPSVVELAASSDVL 340
Query: 235 SLHCSLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAALDVHE 294
+ C LNEH H++N ++ + P L+N RG VD+ + AAL GR+ A LDV E
Sbjct: 341 VVACPLNEHTRHIVNREVMEALGPRGVLINIGRGPHVDEAAMVAALADGRLGGAGLDVFE 400
Query: 295 NEPFNVFQAYL 305
+EP NV +A L
Sbjct: 401 DEP-NVPEALL 410
>04_01_0033 + 391565-391974,393484-393520,394959-395483
Length = 323
Score = 100 bits (240), Expect = 2e-21
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 92 ALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYWLANMV 151
+LR +V +GVD+ID+ G+ V N +VAD + +++++ RR +
Sbjct: 80 SLRCVVSTAAGVDHIDLAECARRGVVVANSGTVYSGDVADHAVGMVIDVMRR----VSAA 135
Query: 152 REGKKFTGPEQVREASAGCARIRGDTLGIVGLGRIGSAVALRAKAFGFNVIFYDPYLPDG 211
G E ++ G +GI+GLG IGS +A R +AFG VI Y+ P
Sbjct: 136 ERG-------YCMEKGIAETQVSGKRVGIIGLGNIGSLIAKRLEAFGC-VISYNSRNP-- 185
Query: 212 IEKSLGLTRVYTLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQMRPGAFLVNTARGGLV 271
++SL T ++ L SD + + C+LN H++ + + G +VN RG V
Sbjct: 186 -KRSLPYTYYADVRALAADSDVLVVSCALNSETRHIVGGEVLDALGEGGVVVNVGRGANV 244
Query: 272 DDEGLAAALKQGRIRAAALDVHENEP 297
D+ L AL++GRI A LDV E EP
Sbjct: 245 DEAALVRALREGRIAGAGLDVFEGEP 270
>04_01_0036 + 436592-437572
Length = 326
Score = 96.7 bits (230), Expect = 4e-20
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 8/214 (3%)
Query: 85 EDLEKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRT 144
E L+ +LR I+ + +G ++ID++ G+ V N G +VAD + L+L++ R
Sbjct: 66 ELLDAVPSLRCIITVSAGTNHIDLRECARRGVQVANAGGIYSTDVADYAVGLLLDVLRHV 125
Query: 145 YWLANMVREGKKFTGPEQVREASAGC-ARIRGDTLGIVGLGRIGSAVALRAKAFGFNVIF 203
VR G PEQ ++I G +GI+GLG IGSA+A R +AFG V +
Sbjct: 126 SAGDRFVRRG---LCPEQRGGDFLPLGSKIGGRRVGIIGLGSIGSAIARRLEAFGCVVSY 182
Query: 204 YDPYLPDGIEKSLGLTRVYTLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQMRPGAFLV 263
++ + + + T DL SD + + C+L +++ + + +V
Sbjct: 183 HNRRRREDVAYAY----FPTATDLAASSDVLVVACALTAETRRIVDRGVLDALGERGVVV 238
Query: 264 NTARGGLVDDEGLAAALKQGRIRAAALDVHENEP 297
N ARG VD+ L AL +GR+ A L+V ++EP
Sbjct: 239 NVARGANVDEAELVRALAEGRVAGAGLEVFDDEP 272
>06_03_0086 +
16458881-16458952,16461795-16461966,16462621-16462889,
16463045-16463316,16463409-16463533,16463852-16463964,
16464579-16464692
Length = 378
Score = 95.9 bits (228), Expect = 6e-20
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
Query: 77 WHTIILTKEDLEKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCL 136
+H +T E ++K K L +++ G G D+ID+ AA G+ V + G VA+ +
Sbjct: 98 FHPAYITAERIKKAKNLELLLTAGVGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMR 157
Query: 137 ILNLYRRTYWLANMVREGKKFTGPEQVREASAGCARIRGDTLGIVGLGRIGSAVALRAKA 196
IL L R + + G V + + G T+G VG GRIG + R K
Sbjct: 158 ILLLLRNF-----LPGHHQIVNGEWNVAGIAHRTYDLEGKTVGTVGAGRIGRLLLQRLKP 212
Query: 197 FGFNVIFYDPYLPDG-IEKSLGLTRVYTLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQ 255
F N++++D D +EK +G L +L + D V ++ L E + N+ I +
Sbjct: 213 FNCNLMYHDRVKIDPELEKEIGAKYEEDLDAMLPKCDVVVINMPLTEKTRGMFNKERIAK 272
Query: 256 MRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAALDVHENEP 297
M+ G +VN ARG ++D + +A A G + DV +P
Sbjct: 273 MKKGVTIVNNARGAIMDTQAVADACASGHVAGYGGDVWFPQP 314
>06_03_0085 +
16431503-16431568,16431981-16432152,16432402-16432464,
16432792-16433332,16433419-16433543,16433988-16434100,
16434565-16434678
Length = 397
Score = 95.9 bits (228), Expect = 6e-20
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 77 WHTIILTKEDLEKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCL 136
+H ++ E ++K K L +++ G G D+ID+ AA G+ V V G VA+ +
Sbjct: 117 FHPAYVSAERIKKAKNLELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMR 176
Query: 137 ILNLYRRTYWLANMVREGKKFTGPEQVREASAGCARIRGDTLGIVGLGRIGSAVALRAKA 196
IL L R V G+ V + + G T+G VG GRIG + R K
Sbjct: 177 ILILLRNFLPGYQQVVHGEW-----NVAGIAYRAYDLEGKTVGTVGAGRIGRLLLQRLKP 231
Query: 197 FGFNVIFYDPYLPDG-IEKSLGLTRVYTLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQ 255
F N++++D D +EK +G L +L + D + ++ L E + N+ I +
Sbjct: 232 FNCNLLYHDRLKIDPELEKEIGAKYEEDLDAMLPKCDVIVINTPLTEKTRGMFNKERIAK 291
Query: 256 MRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAALDVHENEP 297
M+ G +VN ARG ++D + +A A G++ DV +P
Sbjct: 292 MKKGVIIVNNARGAIMDTQAVADACSSGQVAGYGGDVWFPQP 333
>02_01_0012 -
80014-80104,80190-80308,80480-80524,80726-80911,
81027-81101,81213-81304,81731-81803,81923-82004,
82096-82217,82249-82440,82682-82804
Length = 399
Score = 86.6 bits (205), Expect = 4e-17
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 45/234 (19%)
Query: 102 GVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYWLANMVREGKKFTGP- 160
G +N+DV+AA GIAV N P V+ +C +++ R +YW+ + +
Sbjct: 68 GYNNVDVEAANRNGIAVGNTP------VSSAALCFLIS--RLSYWMGVLTETTAELAASL 119
Query: 161 -----EQVREAS----AGCAR-----------IRGDTLGIVGLGRIGSAVA-LRAKAFGF 199
++ EA AG ++G T+G++G GRIGSA A + + F
Sbjct: 120 SLAAARRIVEADQFMRAGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMIEGFKM 179
Query: 200 NVIFYDPYLPDGIEKSLGL---------------TRVYTLQDLLFQSDCVSLHCSLNEHN 244
N+I+YD Y +EK + R T++D+L ++D +SLH L++
Sbjct: 180 NLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRAATMEDVLREADVISLHPVLDKTT 239
Query: 245 HHLINEFTIKQMRPGAFLVNTARGGLVDDEGLAAALKQGRIRAAALDVHENEPF 298
+HLIN + M+ A LVN +RG ++D+ L LK + LDV E+EP+
Sbjct: 240 YHLINPERLAIMKKEAVLVNASRGPVIDEVALVEHLKANPMFRVGLDVFEDEPY 293
>07_01_1064 +
9385330-9385432,9386181-9386236,9386938-9387082,
9387126-9387298,9388058-9388129,9388222-9388336,
9388418-9388521,9388604-9388645,9388932-9389144,
9389621-9389689
Length = 363
Score = 50.4 bits (115), Expect = 3e-06
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 106 IDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYWLANMVREGKKFTGPEQVRE 165
+DV AA E I V +PG + C + +Y ++R+ K + ++
Sbjct: 118 VDVNAATEHKIKVARIPG---STTGNAVSCAEMAIYLTL----GVLRKQKVMDTAVKRKD 170
Query: 166 ASAGCA-RIRGDTLGIVGLGRIGSAVALRAKAFGFNVI-----FYDPYLPDGIEKSLGLT 219
I G ++ I+G G IG +A R + FG ++ + LP I++ +
Sbjct: 171 LGIPVGDTIFGKSVLILGFGAIGVEIAKRLRPFGVKILATKRNWSSDTLPCDIDELVDKK 230
Query: 220 R-VYTLQDLLFQSDCVSLHCSLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVDDEGLAA 278
+ + ++D V L +++ + M+ G++LVN ARG L+D + +
Sbjct: 231 GGPEDMYEFAGEADIVITCLLLTNETVGIVDHKFLSAMKKGSYLVNIARGRLLDYDAVFN 290
Query: 279 ALKQGRIRAAALDVHENEPFN 299
LK G + +DV EP++
Sbjct: 291 HLKSGHLGGLGIDVAWTEPYD 311
>04_01_0037 + 444239-444667,444817-444825
Length = 145
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 93 LRIIVRIGSGVDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYWLANMVR 152
L I+V +GVD+ID+ A GI+V N +VAD + L++ + RR +R
Sbjct: 69 LEIVVATSTGVDHIDLDACRRRGISVTNAGEVFAPDVADYAVGLVVAVLRRVAAAEAYLR 128
Query: 153 EGK 155
G+
Sbjct: 129 RGR 131
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 34.7 bits (76), Expect = 0.17
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 259 GAFLVNTARGGLVDDEGLAAALKQGRIRAAALDVHENEPFN 299
G++LVN ARG ++D + + LK G + +DV EP++
Sbjct: 190 GSYLVNIARGHILDYDAVFDHLKSGHLGGLGIDVAWTEPYD 230
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 81 ILTKEDLEKFKALRIIVRIGSGVDNIDVKAAGELGIAVCNVPG 123
++ + + K +++I++ G G++ +DV AA E I V + G
Sbjct: 50 LIDSDIIAKASQMKVIMQYGVGIEGVDVNAATEHKIKVARING 92
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 34.3 bits (75), Expect = 0.22
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 177 TLGIVGLGRIGSAVALRAKAFGFNVIFYDPYLP 209
T+G +GLG +G +A GF+VI YD Y P
Sbjct: 325 TIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKP 357
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 175 GDTLGIVGLGRIGSAVALRAKAFGFNVIFYDPYLPDGIEKSLGLTRVYTL 224
GD++ ++G+G +GS+ AKAFG + + L + ++ + L +T+
Sbjct: 240 GDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTLGATHTV 289
>03_05_0124 +
21034963-21035181,21035618-21037466,21037485-21038194,
21038426-21038470,21038557-21038745
Length = 1003
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 36 GRDCTVEMPILKDVA-TVAFCDAQSTSEIHEKVLNEAVGALMWHTIILTKED 86
G DC ++ D+A ++++ D H K +NEA G+L + +++++ D
Sbjct: 454 GHDCFTMHDLVHDLAASISYEDILRIDTQHMKSMNEASGSLRYLSLVVSSSD 505
>11_06_0432 +
23448482-23448570,23448987-23449100,23449514-23449580,
23449614-23449741,23452786-23453071,23453264-23453414,
23453603-23453799
Length = 343
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 175 GDTLGIVGLGRIGSAVALRAKAFGFNVIFY 204
G +LG++GLG +G KAFG V +
Sbjct: 170 GKSLGVIGLGGLGHMAVKFGKAFGLKVTVF 199
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 175 GDTLGIVGLGRIGSAVALRAKAFGFNV 201
G +LG++GLG +G KAFG V
Sbjct: 181 GKSLGVIGLGGLGHMAVKFGKAFGLKV 207
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 175 GDTLGIVGLGRIGSAVALRAKAFGFNV 201
G +G+VGLG +G AKAFG V
Sbjct: 182 GKHVGVVGLGGLGHVAVKFAKAFGMRV 208
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 175 GDTLGIVGLGRIGSAVALRAKAFGFNV 201
G +G+VGLG +G AKAFG V
Sbjct: 179 GKHVGVVGLGGLGHVAVKFAKAFGMRV 205
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 175 GDTLGIVGLGRIGSAVALRAKAFGFNV 201
G LG+VGLG +G KAFG +V
Sbjct: 185 GRRLGVVGLGGLGHVAVKFGKAFGLHV 211
>01_01_0145 + 1327172-1327362,1327491-1328169
Length = 289
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 270 LVDDEGLAAALKQGRIRAAALDVHENEPFNV 300
++D+ A + G +R + VH+++PFNV
Sbjct: 156 ILDEHATDAVVAMGSLRGTTVTVHKSKPFNV 186
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,811,736
Number of Sequences: 37544
Number of extensions: 451411
Number of successful extensions: 956
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 897
Number of HSP's gapped (non-prelim): 35
length of query: 487
length of database: 14,793,348
effective HSP length: 85
effective length of query: 402
effective length of database: 11,602,108
effective search space: 4664047416
effective search space used: 4664047416
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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