GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002345-TA|BGIBMGA002345-PA|IPR003689|Zinc/iron permease
         (330 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   5.1  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   6.8  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 154 RWMGRCLLREAREKALRASKEKTEKKDVA 182
           RW+    LRE RE A R  +E   +++ A
Sbjct: 63  RWLMEEKLREQREDAQRREEEARRREEAA 91


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 109 ICNGTVTAKQIYDSCIFNNN 128
           +C G   AK++YD  + N N
Sbjct: 17  VCGGNPDAKRLYDDLLSNYN 36


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,690
Number of Sequences: 2123
Number of extensions: 10448
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 2
length of query: 330
length of database: 516,269
effective HSP length: 64
effective length of query: 266
effective length of database: 380,397
effective search space: 101185602
effective search space used: 101185602
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)