GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002344-TA|BGIBMGA002344-PA|undefined
         (55 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   0.98 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   1.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   5.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    18   9.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        18   9.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    18   9.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    18   9.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    18   9.1  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 0.98
 Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 2/27 (7%)

Query: 13  VEEL--DEHPWIFASLASMLVGLSGIL 37
           V+EL  D +  + ++LAS+++GLS IL
Sbjct: 332 VKELVADPNQHVKSALASVIMGLSPIL 358


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 1.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 7   EYLSNFVEELDE 18
           EYL+ F+EEL E
Sbjct: 313 EYLNLFLEELSE 324



 Score = 18.6 bits (36), Expect = 5.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)

Query: 36   ILPLFIIPLDSSATF 50
            + P++  P D+ ATF
Sbjct: 2028 VAPMYAHPEDADATF 2042


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory
          receptor candidate 61 protein.
          Length = 670

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 23 FASLASMLVGLSGILPLFII 42
          FA L   +V LSG   +FI+
Sbjct: 78 FAKLLIFVVSLSGNSAVFIM 97


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)

Query: 44  LDSSATFEDG 53
           +D+SA F+DG
Sbjct: 510 VDNSAKFKDG 519


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 34  SGILPLFIIPLDS 46
           S  LP  ++PLDS
Sbjct: 334 SEALPFELLPLDS 346


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 7   EYLSNFVEELDEHPWIFASLASMLVGLSGILPLF 40
           E  ++FV  L ++  +FA+     +  S I  +F
Sbjct: 278 ENFNDFVTALKDNVPVFAAARFYAINRSTIFRMF 311


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 7   EYLSNFVEELDEHPWIFASLASMLVGLSGILPLF 40
           E  ++FV  L ++  +FA+     +  S I  +F
Sbjct: 278 ENFNDFVTALKDNVPVFAAARFYAINRSTIFRMF 311


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 7   EYLSNFVEELDEHPWIFASLASMLVGLSGILPLF 40
           E  ++FV  L ++  +FA+     +  S I  +F
Sbjct: 598 ENFNDFVTALKDNVPVFAAARFYAINRSTIFRMF 631


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.139    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,551
Number of Sequences: 317
Number of extensions: 345
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 55
length of database: 114,650
effective HSP length: 35
effective length of query: 20
effective length of database: 103,555
effective search space:  2071100
effective search space used:  2071100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.6 bits)
S2: 34 (17.8 bits)