GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002342-TA|BGIBMGA002342-PA|undefined
         (112 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   0.97 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   0.97 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   1.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   3.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   3.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   6.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   9.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   9.0  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 69  FFVTFFKFLVCCSVVIGFWAPLKTSKLVAAIQYSSLYF 106
           F   F   L CCSV+ G    LK  ++   I+   + F
Sbjct: 91  FEEVFSSLLSCCSVIFGCIFALKVIEVFKNIEEVDVAF 128



 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 69  FFVTFFKFLVCCSVVIGFWAPLKTSKLVA 97
           +F TF+ F   C V+   W   +T + V+
Sbjct: 325 YFFTFWAFSNACEVMAIVWITSETCEEVS 353


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 69  FFVTFFKFLVCCSVVIGFWAPLKTSKLVAAIQYSSLYF 106
           F   F   L CCSV+ G    LK  ++   I+   + F
Sbjct: 91  FEEVFSSLLSCCSVIFGCIFALKVIEVFKNIEEVDVAF 128



 Score = 22.2 bits (45), Expect = 1.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 69  FFVTFFKFLVCCSVVIGFWAPLKTSKLVAA 98
           +F TF+ F   C V+   W   +T + + A
Sbjct: 325 YFFTFWAFSNACEVMAIVWITSETCEEIVA 354


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 58  VNYYDANFYNAFFVTFFKFLVCCSVVIGFWAPLKTSKLVAAIQYSSLYFDFILTM 112
           V  Y A     F   F    V C V    W+P+  ++        SLY+   +T+
Sbjct: 125 VKVYQAPVLQLFLYIFTYLSVTCYVTYA-WSPIDHTESNIINDMCSLYYILQITL 178


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 12  EVLLRVPPLFVVDEFLKISLGLPVSSEEVPVLSNVTVDHVDI 53
           ++LL +   ++  + + IS  L +  E   V++  T+D  D+
Sbjct: 212 KILLMIQLYYLYFDVIVISTFLQLFLEHYEVINRQTLDTADV 253


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 12  EVLLRVPPLFVVDEFLKISLGLPVSSEEVPVLSNVTVDHVDI 53
           ++LL +   ++  + + IS  L +  E   V++  T+D  D+
Sbjct: 138 KILLMIQLYYLYFDVIVISTFLQLFLEHYEVINRQTLDTADV 179


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 63  ANFYNAFFVTFFKF 76
           ANFY+A     +KF
Sbjct: 465 ANFYDAMICVAYKF 478


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)

Query: 4   RLKALALVEVLLRVPPL 20
           R+K L L  VLLR P L
Sbjct: 581 RVKDLFLEAVLLRYPDL 597


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 65  FYNAFFVTFFKFLVCCSVVI 84
           FY+AF +     L  C ++I
Sbjct: 215 FYSAFIIFTIHLLFYCVLII 234


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.330    0.144    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,849
Number of Sequences: 317
Number of extensions: 1156
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 112
length of database: 114,650
effective HSP length: 49
effective length of query: 63
effective length of database: 99,117
effective search space:  6244371
effective search space used:  6244371
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.9 bits)
S2: 38 (19.4 bits)