Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002342-TA|BGIBMGA002342-PA|undefined
(112 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6 |Schi... 27 0.53
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 27 0.70
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 26 1.2
SPAC869.11 ||SPAC922.08c|amino acid permease, unknown 6|Schizosa... 26 1.6
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 25 2.2
SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyce... 25 2.8
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 24 5.0
SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb... 24 5.0
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 24 6.6
SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown 7|Schizos... 24 6.6
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 6.6
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 24 6.6
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 23 8.7
SPAC688.06c |slx4||structure-specific endonuclease subunit |Schi... 23 8.7
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 23 8.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 23 8.7
>SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 624
Score = 27.5 bits (58), Expect = 0.53
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 14 LLRVPPLFVVDEFLKISLGLPVS--SEEVPVLSNVTVDHVDILEP 56
LL +P L+VV++ ++I + P S SEE + D+ IL P
Sbjct: 511 LLELPNLYVVEDVVRIEVNEPTSANSEEAEFGLPIKRDYGSILHP 555
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 27.1 bits (57), Expect = 0.70
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 76 FLVCC---SVVIGFWAPLKTSKLVAAIQYSSLYFDF 108
FL+CC V+ G W + T A + + +F+F
Sbjct: 437 FLICCLLFGVLAGTWETISTGGRFACVALAQFFFNF 472
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 26.2 bits (55), Expect = 1.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 45 NVTVDHVDILEPDVNYYDANFYNAFFV 71
N + +DIL V+ Y +FY AFFV
Sbjct: 361 NQIIMELDILHKAVSPYIVDFYGAFFV 387
>SPAC869.11 ||SPAC922.08c|amino acid permease, unknown
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 1.6
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 64 NFYNAFFVTFFKFLVCCSVVIGFWAPLKTSKLVA 97
N++ +FVTF L C++ +W + ++ ++
Sbjct: 161 NYFINYFVTFPLELTTCAITFRYWTDINSAAWIS 194
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 2.2
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 64 NFYNAFFVTFFKFLVCCSVVIGFWAPLKT 92
N++ +FVTF L C++ +W + +
Sbjct: 168 NYFMNYFVTFPLELTTCAITFRYWTDINS 196
>SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 25.0 bits (52), Expect = 2.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 64 NFYNAFFVTFFKFLVCCSVVIGFW 87
N++ +FVTF L C++ FW
Sbjct: 161 NYFFNYFVTFPFELTTCAITFTFW 184
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 24.2 bits (50), Expect = 5.0
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 58 VNYYDANFYNAFFVTFFKFLVCCSVVIGFWAPLKTSKLVAAIQYSSLYFDFI 109
+ ++ + FY A + FF S++I W T+ V + ++ F F+
Sbjct: 888 MKHFGSGFYVAAVLLFFVTTQATSILIDLWVAFWTNSSVNSPDVNNNKFLFV 939
>SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 983
Score = 24.2 bits (50), Expect = 5.0
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 86 FWAPLKTSKLVAAIQYSSLYFDFI 109
F++P T K A I Y SL++DF+
Sbjct: 292 FYSPCLT-KFPATIDYISLHYDFL 314
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 23.8 bits (49), Expect = 6.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 59 NYYDANFYNAFFVTFFKF 76
N YD FYN FF F +
Sbjct: 332 NIYDNGFYNNFFSLVFPY 349
>SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 581
Score = 23.8 bits (49), Expect = 6.6
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 64 NFYNAFFVTFFKFLVCCSVVIGFWAPLKTSKLVA 97
N++ +FVT L C++ FW + ++ ++
Sbjct: 161 NYFLNYFVTCPLELTTCAITFKFWTEINSAAWIS 194
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 23.8 bits (49), Expect = 6.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 33 LPVSSEEVPVLSNVTVDHVDILEPDVNYYD 62
LP S+E V + +NV D V D N D
Sbjct: 333 LPDSAEAVEIANNVKEDIVSTANDDANELD 362
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 23.8 bits (49), Expect = 6.6
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 69 FFVTFFKFLVCCSVVIGFWAPLKTSKLVAAIQYSSLYF 106
F + FKFL+ G W+ ++ SK + Y +F
Sbjct: 1274 FSIGRFKFLIKLLFCHGRWSYVRLSKYILGTFYKEQFF 1311
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 23.4 bits (48), Expect = 8.7
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 15 LRVPPLFVVDEFLKISLGLPVSSEEVPVLSNVTVDHVDILEPDVNY 60
+ VPP ++ L+ ++G +SS PV+SN + + D+ Y
Sbjct: 566 ITVPPPSILS-ILRKNIGKDISSIPAPVVSNEPCNLLQRCAEDLEY 610
>SPAC688.06c |slx4||structure-specific endonuclease subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 23.4 bits (48), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 37 SEEVPVL-SNVTVDHVDILEPDVN 59
+E +P+L S+ + + DILEPD+N
Sbjct: 90 TENLPLLFSSFSDNESDILEPDLN 113
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 23.4 bits (48), Expect = 8.7
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Query: 65 FYNAFFVTFFKF-LVCCSVVIGFW 87
F NAF + F F L CCS W
Sbjct: 9 FGNAFLIYFIIFRLCCCSPQTSHW 32
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 23.4 bits (48), Expect = 8.7
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 8 LALVEVLLRVPPLFVVDEF 26
L+L+ V LR+ P++ +DEF
Sbjct: 170 LSLLNVQLRIQPIWWMDEF 188
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.330 0.144 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,449
Number of Sequences: 5004
Number of extensions: 21283
Number of successful extensions: 86
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 74
Number of HSP's gapped (non-prelim): 17
length of query: 112
length of database: 2,362,478
effective HSP length: 64
effective length of query: 48
effective length of database: 2,042,222
effective search space: 98026656
effective search space used: 98026656
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 48 (23.4 bits)
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