Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002340-TA|BGIBMGA002340-PA|IPR000357|HEAT
(590 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 573 e-164
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 45 3e-05
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 44 8e-05
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 39 0.002
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 35 0.036
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 33 0.15
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 29 1.4
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 29 1.4
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 29 1.8
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 28 3.2
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 28 4.2
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 28 4.2
SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomy... 28 4.2
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 5.5
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 5.5
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 27 5.5
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 27 9.6
SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 9.6
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 573 bits (1415), Expect = e-164
Identities = 295/580 (50%), Positives = 397/580 (68%), Gaps = 10/580 (1%)
Query: 12 LYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLAL 71
LYPIAVLIDELK++++ RLN++++LSTIALALG ERT+ ELIPFL E+I DEDEVL AL
Sbjct: 10 LYPIAVLIDELKHDEITYRLNALERLSTIALALGPERTRDELIPFLDESIDDEDEVLSAL 69
Query: 72 AEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFV 131
A+QLG+F++ VGG E+AH LL PLE LAA EETVVRDKAV SL V S + LE++FV
Sbjct: 70 ADQLGNFVDYVGGPEYAHVLLSPLENLAATEETVVRDKAVDSLNKVCICLSQEQLEQYFV 129
Query: 132 PLVQRLAGGDWFTSRTSACGLFSVCYPRVSAP-VKAELRQHFRSLCQDDTPMVRRAAAYK 190
PLVQRL+ +WFTSR S+ GL+ Y + P VK LRQ F LC D+ PMVRR AA
Sbjct: 130 PLVQRLSTAEWFTSRASSAGLYCAAYSQSENPAVKVSLRQSFSHLCHDEAPMVRRPAATN 189
Query: 191 LGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPE-DMEQHVMPT 249
+F +V + + IP+F L+ DDQDSVR + ++ +++
Sbjct: 190 CAKFVFLVTKQEAIDEFIPLFNSLSNDDQDSVRLLSFDIMVSLAEVLKSDSEIRHYLLQP 249
Query: 250 VRALSGDASWRVRYMVADKFVELQQAVGQELARTDLAQIFQALLKDSEAEVRAAAAGKVK 309
+R+ D+SWR RYMVA FV+L + VG L + +L + F L+KD+E EVR A A ++
Sbjct: 250 LRSFVSDSSWRTRYMVAANFVKLAKVVGPSLIKDELIKPFVLLMKDTEQEVRRAIATQIP 309
Query: 310 DFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLP 369
FC LDK I++ I+P I++L+ D QHV++AL I L+P +G++ T E+LLP
Sbjct: 310 GFCELLDK----RIVLEEIIPVIQELINDPAQHVRAALGMNIGALAPQLGKEKTTEYLLP 365
Query: 370 LFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHM 429
+FL LKDE PEVRLNIIS LE VN+V+GI+ L QSLLPAIV LAED +WRVRLAII+++
Sbjct: 366 MFLELLKDENPEVRLNIISKLEVVNKVVGIELLSQSLLPAIVTLAEDKQWRVRLAIIDYI 425
Query: 430 PLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVL 489
PLLA QLG EFF+EK+ +LCMSWL DHVY+IREAA NL+KL E +G +WA +IPK L
Sbjct: 426 PLLAQQLGVEFFNEKMGNLCMSWLEDHVYSIREAAIKNLRKLTEIFGLEWATETIIPKFL 485
Query: 490 NMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIM 549
M NYL+RMT +F I+ ++ ++ + +LPT+ + +D + N+RFNVAK +++
Sbjct: 486 AMRSHPNYLYRMTTIFAISEIAPALNAEVIEKQILPTLEQLVNDPIPNIRFNVAKAFEVL 545
Query: 550 AKYL----DPAVIQPQVKPVLEKLNVDPDVDVKYFASEAI 585
L D V + Q+ P+LE+L D D DV+YFA++A+
Sbjct: 546 KPVLAAGGDSTVYEQQIIPLLEQLTKDNDPDVQYFATQAL 585
Score = 30.3 bits (65), Expect = 0.78
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 500 RMTYLFCINV--LSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAV 557
R Y+ N L++V G + L+ + + D VR +A + + LD +
Sbjct: 260 RTRYMVAANFVKLAKVVGPSLIKDELIKPFVLLMKDTEQEVRRAIATQIPGFCELLDKRI 319
Query: 558 IQPQVKPVLEKLNVDPDVDVKYFASEAIAGIA 589
+ ++ PV+++L DP V+ I +A
Sbjct: 320 VLEEIIPVIQELINDPAQHVRAALGMNIGALA 351
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 44.8 bits (101), Expect = 3e-05
Identities = 47/236 (19%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 324 IMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVR 383
I++ IL ++ + + + ++S+ + L G + + L + L +E PEV
Sbjct: 816 IVSTILYRLNNKSANVREQAADLVSSITIVLKAC-GEEALMRKLGVVLYEYLGEEYPEVL 874
Query: 384 LNIISNLECVNEVIGIQQL---VQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEF 440
+I+ ++ + V+G+ + ++ LLP + + + +V+ I+ + +A + +
Sbjct: 875 GSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPILRNRHEKVQENTIDLVGKIADRGSEYV 934
Query: 441 FDEKLTSLC---MSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQNY 497
+ +C + L H +IR AA + + GPQ +V+ +LN Q
Sbjct: 935 SAREWMRICFELIDMLKAHKKSIRRAAVNTFGYISKAIGPQ----DVLATLLNNLKVQER 990
Query: 498 LHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYL 553
+R+ I +++E C ++P +++ NV+ V K+L M +Y+
Sbjct: 991 QNRVCTTVAIAIVAETC----MPFTVVPALMADYRTPEMNVQNGVLKSLAFMFEYI 1042
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 328 ILPQIKDLVCDANQHVKSALASVIMGLS---PIVGRQNTIEHLLPLFLTQLKDECPEVRL 384
I P + D + D + + ASVI LS +G ++ + HLL + + +E P V
Sbjct: 1053 ITPLLADALMDRDAVHRQTAASVIKHLSLGCVGLGVEDAMIHLLNILWPNILEESPHVIN 1112
Query: 385 NIISNLECVNEVIGIQQLVQSLLPAI 410
+ ++ + IG+ ++ L+ +
Sbjct: 1113 AVREGIDGIRNCIGVGPIMAYLVQGL 1138
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 43.6 bits (98), Expect = 8e-05
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 292 LLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVI 351
LL DS + VR + + C+ KA +I++ ++ + D + ++ A I
Sbjct: 600 LLADSSSIVRRSLLNALAPLCVFFGKAKSNDLILSHLITYLND----TDWMLRCAFFESI 655
Query: 352 MGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLV 403
GLS +G ++ E++LPL L L D P V +++ + + E+ ++LV
Sbjct: 656 TGLSIFIGPRSVDEYILPLMLQALVDPEPAVLESVLGSFSGLIELHLFEKLV 707
Score = 37.1 bits (82), Expect = 0.007
Identities = 48/255 (18%), Positives = 110/255 (43%), Gaps = 9/255 (3%)
Query: 327 MILPQIKDLVCDAN-QHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLN 385
++LP + + N + K S++ LS + ++ ++ +LP +T L+D+ +VR++
Sbjct: 431 VLLPIVLSTIRHVNTRESKINALSLVQILSRNICDESKLDTVLPFVMTLLRDQYADVRIS 490
Query: 386 -IISNLECVNEVIGIQQL-----VQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQE 439
+I+ V+ V I + + L P + D R R +P+LA Q +
Sbjct: 491 ALITITRLVSNVTSIAPINAFLFQEYLFPDLQHFLFDMNSRTRATYASCLPILAKQASK- 549
Query: 440 FFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQNYLH 499
F SL + ++ + E +L+ + G V V + + + +
Sbjct: 550 -FLNLAQSLRNAGILSFPESEYENINHGKAELLFETGRHDLVVTVERHVSTLLADSSSIV 608
Query: 500 RMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQ 559
R + L + L GK + ++L +++ +D +R +++ ++ ++ P +
Sbjct: 609 RRSLLNALAPLCVFFGKAKSNDLILSHLITYLNDTDWMLRCAFFESITGLSIFIGPRSVD 668
Query: 560 PQVKPVLEKLNVDPD 574
+ P++ + VDP+
Sbjct: 669 EYILPLMLQALVDPE 683
Score = 36.3 bits (80), Expect = 0.012
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 373 TQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLL 432
T L D VR ++++ L + G + +L ++ DT W +R A E + L
Sbjct: 599 TLLADSSSIVRRSLLNALAPLCVFFGKAKSNDLILSHLITYLNDTDWMLRCAFFESITGL 658
Query: 433 AGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVE 473
+ +G DE + L + LVD A+ E+ + L+E
Sbjct: 659 SIFIGPRSVDEYILPLMLQALVDPEPAVLESVLGSFSGLIE 699
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 38.7 bits (86), Expect = 0.002
Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 8/186 (4%)
Query: 244 QHVMPTVRALSGDASWRVRYMVADKFVELQQAVGQELARTDLAQIFQALLKDSEAEVRAA 303
+ +MP +R + D R A L + +G++ T + ++F L + R
Sbjct: 1640 ESLMPRLREVLIDPVPDTRATAAKALGSLIEKLGEKKFPTLIPELFNVLRSECSEVDRQG 1699
Query: 304 AAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGR--Q 361
AA + + L A E + LP+I H++ + S+++ L G Q
Sbjct: 1700 AAQGLSEILAGLGLARLEDV-----LPEILKNTSSPVPHIRESFISLLIYLPATFGSRFQ 1754
Query: 362 NTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRV 421
+ +P L+ L D+ V+ + + + + V LLP + + D WR+
Sbjct: 1755 PYLARAIPPILSGLADDSELVQTASLRAAKMIVNNYATKS-VDLLLPELEKGLFDNAWRI 1813
Query: 422 RLAIIE 427
RL+ ++
Sbjct: 1814 RLSSVQ 1819
Score = 35.5 bits (78), Expect = 0.021
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 402 LVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQ--EFFDEKLTSLCMSWLVDHVYA 459
++ SLL + +E + V + + PL+ LG+ E++ E L++ M+ A
Sbjct: 1324 VMDSLLSVLSTPSESVQLAVAVCL---PPLVKKSLGKSKEYY-ELLSNKLMN---STSLA 1376
Query: 460 IREAATLNLKKLVEQYGPQ-WAENNVIPKVLNM-SHEQNYLHRMTYLFCINVLSEVCGKD 517
++ A L LV+ YG + + + N++ + + S+ QN HR LF + S + G
Sbjct: 1377 DQKGAAYGLAGLVKGYGIKAFQDFNILDSLSELISNRQNATHRQVALFAVEAFSRILGIY 1436
Query: 518 ITTRV--LLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLN 570
+ LLP +L+ DN VR ++ + L ++ + +L+ LN
Sbjct: 1437 FEPYLPDLLPLLLTSFGDNANEVREATMDAVKQIMSQLSAFGVKLLLPTLLDGLN 1491
Score = 34.3 bits (75), Expect = 0.048
Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 20/274 (7%)
Query: 328 ILPQIKDLVCDANQ--HVKSALASVIMGLSPIVGR--QNTIEHLLPLFLTQLKDECPEVR 383
IL + +L+ + H + AL +V S I+G + + LLPL LT D EVR
Sbjct: 1402 ILDSLSELISNRQNATHRQVALFAV-EAFSRILGIYFEPYLPDLLPLLLTSFGDNANEVR 1460
Query: 384 LNIISNLECVNEVIGIQQL--VQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEF- 440
+ ++ V +++ V+ LLP +++ + WR + A +E + L++ ++
Sbjct: 1461 E---ATMDAVKQIMSQLSAFGVKLLLPTLLDGLNEYNWRSKKASVEILGLMSYMAPKQLS 1517
Query: 441 -FDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLN-MSHEQNYL 498
F + L D +R A +L + + + ++P +L +S Y
Sbjct: 1518 VFLPTIIPKLSEVLTDSHSQVRNTANKSLLRFGDVISNPEIQ-TLVPTLLKALSDCTRYT 1576
Query: 499 HRMTYLFCINVLSEVCGKDITTRVLLPTVLSMA-DDNVANVRFNVAKTLQIMAKYLDP-- 555
L + S V D + L+ +L + A + AK +MA +P
Sbjct: 1577 D--DALEALLKTSFVHYLDPPSLALVIPILKYGLRERNAGTKRQSAKIFGLMASLTEPEN 1634
Query: 556 -AVIQPQVKPVLEKLNVDPDVDVKYFASEAIAGI 588
AV + P L ++ +DP D + A++A+ +
Sbjct: 1635 LAVYLESLMPRLREVLIDPVPDTRATAAKALGSL 1668
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 34.7 bits (76), Expect = 0.036
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 484 VIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRV--LLPTVLSMADDNVANVRFN 541
+IP+ + ++ +N R LFC+N + + + + L T ++A D NVR N
Sbjct: 179 MIPRFIELARHENPKIRTDALFCLNQFVLIQSQSLYAHIDTFLETCYALATDVSPNVRKN 238
Query: 542 VAKTLQIMAKYLDPAVIQPQVKPVLEKL---NVDPDVDVKYFASEAIAGIA 589
V + L + + P I P + ++E + D D +V A E IA
Sbjct: 239 VCQALVYLLD-VRPDKIAPSLGSIVEYMLYSTQDSDQNVALEACEFWLAIA 288
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 32.7 bits (71), Expect = 0.15
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 382 VRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVR-LAIIEHMPLLAGQLGQEF 440
V LNIIS++ N + ++ + SLLPA+ +L+ + + LA + L+ +
Sbjct: 467 VLLNIISSVIGRNAELDLENPISSLLPALEQLSNYSNREISDLAKDVYKTLIQSK----- 521
Query: 441 FDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQN-YLH 499
D+ SL +S+ + +R L+KL+E+ + V+ ++N+ ++N Y+H
Sbjct: 522 -DD--YSLALSYTQSDLVPVRGQGVYMLRKLIEKKDDRINPVRVLHVLINLLRDENSYVH 578
Query: 500 RMTYLFCINVLSEVCGK 516
L I+ + +C K
Sbjct: 579 ----LNVISAVVSLCDK 591
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 325 MTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRL 384
M ++P IK+ + D + A + ++ L +V + I H +P + + PE
Sbjct: 177 MAALIPCIKERMHDTKPEISRAAITCMLNLCSVVENNDIIPH-IPKLVDCMAH--PETLE 233
Query: 385 NIISNLECVNEVIGIQQLVQSLLPAIVE--LAEDTKWRVRLAII 426
I +L V ++ + ++L I++ LA+ ++ +RL +I
Sbjct: 234 ACIKDLSATTFVATVESVALAVLVPILKRALAQRSQSMLRLTVI 277
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 29.5 bits (63), Expect = 1.4
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 20 DELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGSFI 79
DEL +V + K L T A + K EL+P L Y +D+ + E+L S +
Sbjct: 88 DELSRSNVS---SPEKTLLTSASTSTFDSLKKELLPELPSLAYSDDDEFPSSPEELNSHV 144
Query: 80 NL--VGGGEFAHCLLPPLETLAAVEETVVRDKAVAS 113
N V H L PL +E+ R K AS
Sbjct: 145 NYPDVRNVYDCHTGLQPLVDHDCIED---RQKTFAS 177
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 29.1 bits (62), Expect = 1.8
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 260 RVRYMVADKFVELQQAVGQELAR-TDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKA 318
+ + +VA + +L QA+ + L R ++ F+ L+ E+ + ++F L
Sbjct: 953 QAKVLVA-RLTQLLQALEETLRRRNEMWTKFRKLITLRTKELFELYLSQ-RNFTGKLVIK 1010
Query: 319 HQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDE 378
HQE + + P ++L N+H KS ++ + GLS G + + + L
Sbjct: 1011 HQEEFLEPRVYPANRNLATAHNRHEKSKVS--VQGLS---GGEKSFATICMLLSIWEAMS 1065
Query: 379 CPEVRLNIIS-NLECVNEVIGIQQLVQS 405
CP L+ ++ VN ++ I+ +V S
Sbjct: 1066 CPLRCLDEFDVFMDAVNRLVSIKMMVDS 1093
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 508 NVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLE 567
++++ K LL ++ + +D +R N L +A+YLD +V +P + L
Sbjct: 405 SIIAPKLSKKTLNNELLRSLAVVQNDQHPTLRTNSTICLGKIAEYLDASVRKPVLAAALS 464
Query: 568 KLNVDPDVDVKYFASEAIAGI 588
+ DP V + A + + +
Sbjct: 465 RSLKDPFVPAREAALKVLLSV 485
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 27.9 bits (59), Expect = 4.2
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 284 DLAQIFQALLKDSEAEVRAAAAGKVKDFC-MNLDKAHQEHIIMTMILPQIKDLVCDANQH 342
D+ +F A L+DSE EVR+ AA + C + + E++ IL +++ +
Sbjct: 894 DVFSLFMAALEDSEGEVRSNAAYSMGLLCQFSTEDLSSEYL---NILQKLQPFF--TQEV 948
Query: 343 VKSALASVIMGLSP-IVGRQNTI--EHLLPLFLTQL 375
++AL + I +S I+ QN I + +LP+ ++L
Sbjct: 949 FRTALDNAIGCISRLILHNQNAIPVDQVLPIVFSKL 984
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 33 SIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGSFINLV 82
SIKK T + G+E +S ++ F + DE L+ Q+ S +NL+
Sbjct: 138 SIKKEGTQVIVFGIETVRSMVLSFPLIILSTLDENFLSEVAQVFSSLNLL 187
>SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 476 GPQWAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGK 516
GPQ ++NV+P+V+ S E Y + + LSE GK
Sbjct: 456 GPQVHQSNVLPRVIQQSSE--YANTQLQYISLTELSERFGK 494
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 21 ELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGS 77
EL+NE +Q LNS K L T L E ++L+ FL T + E + +L QL +
Sbjct: 295 ELENEKIQTELNSWKSLITNELPT-PEAVSNKLV-FLQNTNANLGERVSSLESQLSN 349
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 8 TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVER 48
TDES++P+ + +++++D + +S L + A+A G +
Sbjct: 64 TDESMFPLDSELTDMEDDDTEYISDSTTDLPSAAMARGTRQ 104
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 27.5 bits (58), Expect = 5.5
Identities = 34/216 (15%), Positives = 85/216 (39%), Gaps = 10/216 (4%)
Query: 199 EIEYVKSDLIPIFVILAEDDQDSVRXXXXXXXXXXXXXXTPEDMEQHVMPTVRALSGDAS 258
++E +L+P + D Q++VR TP ++ V + ++
Sbjct: 88 DVEPYLVELLPAVIAKVADKQNAVRDAAIAASKAIVRCTTPYAVKAIVPSVLESIHTTGK 147
Query: 259 WRVRYMVADKFVELQQAVGQELARTDLAQIFQAL---LKDSEAEVRAAAAGKVKDFCMNL 315
W + M + + +++ V L QI + + D++AEV+ + + C +
Sbjct: 148 WNEK-MNSLQLLDVLVEVAPSQLSYSLPQIIPVVSESMWDTKAEVKKQSKETMTKVCTLI 206
Query: 316 DKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQL 375
A + I P++ + + + V + S+ + T+ ++PL L
Sbjct: 207 ANADIDRFI-----PELINCIAHP-EEVPETIHSLGATTFVTEVQAPTLSIMVPLLARGL 260
Query: 376 KDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIV 411
+ ++ ++ +++++ Q+V LP ++
Sbjct: 261 NERSTPIKRKTAVIIDNMSKLVEDPQVVAPFLPKLL 296
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 91 LLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPLV 134
LLP + A ++ VRD A+A+ +A+ +P A++ VP V
Sbjct: 96 LLPAVIAKVADKQNAVRDAAIAASKAIVRCTTPYAVKA-IVPSV 138
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 26.6 bits (56), Expect = 9.6
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 483 NVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNV 542
N++ V+N HR T L C+N + I +R L LS N ANVRF V
Sbjct: 358 NMLKLVVNSEENAVQRHRSTILACLNDVD----SSIQSRAL---ELSTFLVNEANVRFMV 410
Query: 543 AKTLQIMAKYLD 554
+ L + D
Sbjct: 411 RELLSFLDNVSD 422
>SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 177
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 136 RLAGGDWFTSRTSACGLFSVCYPRVSAPVKAELRQHFRSL 175
R+A W + S F C+P+ S + A + + F ++
Sbjct: 95 RIAPARWLITSLSTAATFMFCFPKTSKNIGAFVEKRFPAI 134
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.135 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,418,708
Number of Sequences: 5004
Number of extensions: 93876
Number of successful extensions: 311
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 264
Number of HSP's gapped (non-prelim): 29
length of query: 590
length of database: 2,362,478
effective HSP length: 77
effective length of query: 513
effective length of database: 1,977,170
effective search space: 1014288210
effective search space used: 1014288210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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