Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002338-TA|BGIBMGA002338-PA|undefined
(94 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 0.83
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 25 1.4
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 25 1.9
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 25 1.9
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 25 2.5
SPAC57A7.10c |sec21||coatomer gamma subunit Sec21 |Schizosacchar... 24 3.3
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 24 3.3
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 3.3
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 24 4.4
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 23 5.8
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 23 5.8
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 23 7.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 23 7.7
SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces... 23 7.7
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 23 7.7
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 0.83
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 17 NSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKP 76
N+S+V ++ P + + + DSS+ D S A+Q SD + + N +P
Sbjct: 817 NNSSVNPSLDSEPVQLSNMEEPQHQDSSVVDVSTSASQRGSPVLSDLSKLTGSARNTAEP 876
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.4 bits (53), Expect = 1.4
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 28 SPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSN 72
SPT+ S + L DD S N FT D + S +SN
Sbjct: 438 SPTTPRLSTLALADDMFSSTAKETVPTNEAVFTGDVKSFDSQESN 482
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 25.0 bits (52), Expect = 1.9
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 13 QVIDNSSAVPVAVG--GSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARV 65
Q+ + +A P VG GS S + S D S S GSL N N+ +D++V
Sbjct: 15 QLSISPTAPPGDVGTPGSLLSLSSSSSSNTDSSGSSLGSLSLNSNSSGSDNDSKV 69
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 25.0 bits (52), Expect = 1.9
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 22 PVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARV 65
P AV P +A GS + D+ ++ GSL G SD +
Sbjct: 304 PTAVSPFPGAATGSGGEIRDEGAVGQGSLSKAGLAGYSVSDLNI 347
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 24.6 bits (51), Expect = 2.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 22 PVAVGGSPTSANGSDVFLYDDSSMSDGSL 50
P A SP S NGS + S +SDG+L
Sbjct: 18 PRAAPSSPVSTNGSPLNNLVRSRLSDGAL 46
>SPAC57A7.10c |sec21||coatomer gamma subunit Sec21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 24.2 bits (50), Expect = 3.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 47 DGSLYANQNTGAFTSDARVVRSNKSNRGKPR 77
D S++AN N T DAR S+ + K R
Sbjct: 11 DESIFANVNQVTVTQDARAFNSSSISPRKSR 41
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 24.2 bits (50), Expect = 3.3
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 12 CQVIDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSL 50
C + +S ++ PTS D FL D SDGS+
Sbjct: 610 CSIPSHSDSIAAEPNSVPTSVQYKDRFLVD--GKSDGSV 646
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 24.2 bits (50), Expect = 3.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 13 QVIDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTG 57
Q + ++++VP + PT+ NG + Y S S N N+G
Sbjct: 345 QPMYSTASVPQQISNGPTAVNGLPMNSYTPHSNHLHSPSPNSNSG 389
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 23.8 bits (49), Expect = 4.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 17 NSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYAN 53
N++ P A + T+A+GSD L+ + S+G N
Sbjct: 112 NAAYYPNAAATTTTNADGSDKGLFSGLTSSNGYTTGN 148
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 23.4 bits (48), Expect = 5.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 72 NRGKPRIFGK 81
N GKPR+FGK
Sbjct: 933 NHGKPRLFGK 942
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 23.4 bits (48), Expect = 5.8
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 16 DNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSD 62
+NSS+VP SA+ SD+ YD+ +S + N+ F D
Sbjct: 710 NNSSSVPFV-----DSAHASDIHAYDNDHVSTKNKEFNRRLREFILD 751
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 23.0 bits (47), Expect = 7.7
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 32 ANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNP 87
+N + F +D++ S L+ + N G+ S SN G P F + P
Sbjct: 96 SNWLNPFAFDNTMNSAPPLFTSTNMGSPNSLENSTNPLLSNCGSPNSFQNETFTGP 151
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 23.0 bits (47), Expect = 7.7
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 10 IRCQVIDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNT 56
I Q+I S G T+ D FL D+ S++D S+ N+
Sbjct: 1285 IERQIIKYRSLFEWHDGALVTAMKQGDFFLLDEISLADDSVLERLNS 1331
>SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1009
Score = 23.0 bits (47), Expect = 7.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 28 SPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKS 71
+P + +D + DSS+ +G+ YA+ + G + +VR+ +S
Sbjct: 94 APPLLDYADSYTALDSSLINGNNYADIDVGIYMKVQLLVRAYQS 137
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 23.0 bits (47), Expect = 7.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 16 DNSSAVPVAVGGSPTSANGSDVFLYDDSS 44
D+S + G SP ANG+ L +DSS
Sbjct: 272 DSSLMAHQSYGTSPAFANGNSPTLKNDSS 300
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.131 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,983
Number of Sequences: 5004
Number of extensions: 16173
Number of successful extensions: 30
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 15
length of query: 94
length of database: 2,362,478
effective HSP length: 62
effective length of query: 32
effective length of database: 2,052,230
effective search space: 65671360
effective search space used: 65671360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 47 (23.0 bits)
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