Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002338-TA|BGIBMGA002338-PA|undefined
(94 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39414| Best HMM Match : rve (HMM E-Value=0.0011) 31 0.13
SB_15157| Best HMM Match : DUF1153 (HMM E-Value=1.7) 30 0.31
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.41
SB_32131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.54
SB_6777| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.54
SB_25521| Best HMM Match : NLPC_P60 (HMM E-Value=5.7) 29 0.54
SB_993| Best HMM Match : rve (HMM E-Value=2.7e-33) 29 0.54
SB_24738| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.94
SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40) 28 0.94
SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.94
SB_48376| Best HMM Match : HMG-CoA_red (HMM E-Value=6.8e-11) 28 1.2
SB_41328| Best HMM Match : NLPC_P60 (HMM E-Value=5.8) 28 1.2
SB_23547| Best HMM Match : NLPC_P60 (HMM E-Value=2.5) 27 1.6
SB_34088| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.6
SB_6129| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_37067| Best HMM Match : Mgm101p (HMM E-Value=2.94273e-44) 27 2.9
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12) 25 6.7
SB_27220| Best HMM Match : Seryl_tRNA_N (HMM E-Value=3.2) 25 6.7
SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.7
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.7
SB_963| Best HMM Match : CUB (HMM E-Value=1.8e-19) 25 6.7
SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07) 25 6.7
SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12) 25 6.7
SB_950| Best HMM Match : Flp_N (HMM E-Value=1.7) 25 6.7
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_54002| Best HMM Match : POP1 (HMM E-Value=0) 25 8.8
>SB_39414| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 269
Score = 31.1 bits (67), Expect = 0.13
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 31 SANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNPLM 89
S NGSD+ S + G+L N +A +K N+G P + +E NPL+
Sbjct: 177 SKNGSDIVC---ESETGGTLRRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNPLV 232
>SB_15157| Best HMM Match : DUF1153 (HMM E-Value=1.7)
Length = 412
Score = 29.9 bits (64), Expect = 0.31
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 31 SANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNP 87
S NGSD+ S + G+L N +A + +K N+G P + +E NP
Sbjct: 328 SKNGSDIVC---ESETGGTLRRNVQCAKKVPEATSEKVSKENQGNPELIQDPIESNP 381
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 29.5 bits (63), Expect = 0.41
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 31 SANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNP 87
S NGSD+ S + G+L N +A + +K N+G P + +E NP
Sbjct: 2127 SKNGSDIVC---ESETGGTLRRNVQCAKKVLEATSEKVSKENQGNPELIQDPIESNP 2180
>SB_32131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 29.1 bits (62), Expect = 0.54
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 31 SANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNP 87
S NGSD+ S + G+L N +A +K N+G P + +E NP
Sbjct: 22 SKNGSDIVC---ESETGGTLRRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNP 75
>SB_6777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 29.1 bits (62), Expect = 0.54
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 31 SANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNP 87
S NGSD+ S + G+L N +A +K N+G P + +E NP
Sbjct: 99 SKNGSDIVC---ESETGGTLRRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNP 152
>SB_25521| Best HMM Match : NLPC_P60 (HMM E-Value=5.7)
Length = 212
Score = 29.1 bits (62), Expect = 0.54
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 31 SANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNP 87
S NGSD+ S + G+L N +A +K N+G P + +E NP
Sbjct: 128 SKNGSDIVC---ESETGGTLRRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNP 181
>SB_993| Best HMM Match : rve (HMM E-Value=2.7e-33)
Length = 735
Score = 29.1 bits (62), Expect = 0.54
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 31 SANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNP 87
S NGSD+ S + G+L N +A +K N+G P + +E NP
Sbjct: 651 SKNGSDIVC---ESETGGTLRRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNP 704
>SB_24738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 0.94
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 15 IDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRG 74
I SS V P++ G D DSS SDGSL + +F+S+A R K
Sbjct: 102 ISFSSEGSVDDASPPSARRGLDK---RDSSSSDGSLQGYERFNSFSSEAAEGRRRKLTSP 158
Query: 75 KPR 77
P+
Sbjct: 159 SPK 161
>SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40)
Length = 2057
Score = 28.3 bits (60), Expect = 0.94
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 15 IDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRG 74
I SS V P++ G D DSS SDGSL + +F+S+A R K
Sbjct: 1942 ISFSSEGSVDDASPPSARRGLDK---RDSSSSDGSLQGYERFNSFSSEAAEGRRRKLTSP 1998
Query: 75 KPR 77
P+
Sbjct: 1999 SPK 2001
>SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 28.3 bits (60), Expect = 0.94
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 4 MDGVSGIRCQVIDNSSAVPVAVGGSPTSAN 33
+D V+G C + D+S P VG +P S+N
Sbjct: 295 VDQVNGFTCLLPDSSETCPDNVGANPCSSN 324
>SB_48376| Best HMM Match : HMG-CoA_red (HMM E-Value=6.8e-11)
Length = 135
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 2 FDMDGVSGIRCQVIDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTG 57
+D VSG C+ + +PV V G P +G F+ + ++G L A+ N G
Sbjct: 22 YDYTRVSGACCENVIGYMPIPVGVAG-PLLLDGQQFFV--PMATTEGCLVASTNRG 74
>SB_41328| Best HMM Match : NLPC_P60 (HMM E-Value=5.8)
Length = 155
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 33 NGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECNP 87
NGSD+ S + G+L N +A +K N+G P + +E NP
Sbjct: 73 NGSDIVC---ESETGGTLRRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNP 124
>SB_23547| Best HMM Match : NLPC_P60 (HMM E-Value=2.5)
Length = 232
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 31 SANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVECN 86
S NGSD+ S + G+L N +A + +K N+G P++ +E N
Sbjct: 148 SKNGSDIVC---ESETGGTLRRNVQCAKNVPEATSEKVSKENQGNPQLIQDPIESN 200
>SB_34088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.5 bits (58), Expect = 1.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 18 SSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVR--SNKSNRGK 75
SS V +G G D+ Y D+ SD + GA +S+ R +R + +
Sbjct: 136 SSTVKPEIGNG-IHHKGKDILNYQDTVKSDLVAVTRKTEGAISSNTRPLRRPEKATTKSM 194
Query: 76 PRIFGKDVECNPLMTLLKV 94
I +D E P+ T K+
Sbjct: 195 NAIKFEDKESVPISTKSKI 213
>SB_6129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 15 IDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGA 58
I++ + A GG P GSD+F+ D++ ++ S Y +T A
Sbjct: 39 INDDTRYGPAFGGDPAFGGGSDLFIADNAGGNEES-YTEPSTYA 81
>SB_37067| Best HMM Match : Mgm101p (HMM E-Value=2.94273e-44)
Length = 319
Score = 26.6 bits (56), Expect = 2.9
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 22 PVAVGGSPTSAN--GSDVFLYDDSSMSDGSLYANQNTGAFTSDA 63
P GS TS G+ + ++ DGSLY+ + AF+SDA
Sbjct: 41 PSNSAGSVTSEEDEGTGLVAGQNNRFLDGSLYSGAGSQAFSSDA 84
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 25.8 bits (54), Expect = 5.0
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 7 VSGIRCQVIDNSSAVPVAVGGS-PTSANGSDVFLYDDSSMSDGSLYANQ------NTGAF 59
VS I C+ + S P +GGS P A G+ V + +++ +++A + + G
Sbjct: 158 VSKILCRFYETGSIKPGVIGGSKPKVATGNVVTKIAEYKLANPTMFAWEIRDRLLSEGVC 217
Query: 60 TSDARVVRSNKSNRGKPRIFGKDVECNP 87
TSD S+ + + RI +D NP
Sbjct: 218 TSDNVPSVSSINRIVRNRINSQDKMSNP 245
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 23 VAVGGSPTSANGSDVFLYDDSSMSDGSLYA 52
+A S + NG+D +DDSS +DG +YA
Sbjct: 1756 IASAVSANNKNGND---HDDSSDADGDIYA 1782
>SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12)
Length = 792
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 50 LYANQNTGAFTSDARVVRSNKSNRGKP 76
L +N++TG F+ RV++S+ S KP
Sbjct: 272 LNSNKSTGPFSIPTRVLKSSSSILSKP 298
>SB_27220| Best HMM Match : Seryl_tRNA_N (HMM E-Value=3.2)
Length = 517
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 7 VSGIRCQVIDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGA 58
V ++ +ID+++ A G +P+S G V + +G + Q TG+
Sbjct: 114 VDTVKRSLIDDANRQNSATGQAPSSKKGETVLPSTATGSPNGDILPRQATGS 165
>SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1808
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 29 PTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRIFGKDVE 84
P ++G++ YD++ M+ G+L + + A R V+ +K G P G+ E
Sbjct: 424 PHCSHGNNERCYDNTHMTYGNLGNDYSVLAGEEICRYVKPDKVWDGYPHALGRGYE 479
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 15 IDNSSAVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFT 60
+D ++A P++ GG+ S+ +D D S ++DG+ + T T
Sbjct: 2005 VDGTTAAPISTGGTTVSSISTD-GTTDASIITDGTAAVHITTDGTT 2049
>SB_963| Best HMM Match : CUB (HMM E-Value=1.8e-19)
Length = 507
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 33 NGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSN 72
+G DV + +S MS LY +Q+ + V R N ++
Sbjct: 292 SGEDVEIITESQMSSNPLYGSQSQRSVRRSRTVTRYNTTS 331
>SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07)
Length = 2008
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 7 VSGIRCQVIDNSSAVPVAVGGSPTSANGSDVFLYDDSS 44
+SG++C +D SAV GG + + + D S+
Sbjct: 443 LSGVKCPAVDKRSAVITFFGGGLNNGTAVNCKIRDPST 480
>SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12)
Length = 1338
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 32 ANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKS 71
++G ++ +D+ S+SDG+L Q + R + +KS
Sbjct: 544 SSGGELISFDEQSVSDGNLSVRQAVHEYLQQERRLFLSKS 583
>SB_950| Best HMM Match : Flp_N (HMM E-Value=1.7)
Length = 247
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 50 LYANQNTGAFTSDARVVRSNKSNRGKP 76
L +N++TG F+ RV++S+ S KP
Sbjct: 64 LNSNKSTGPFSIPTRVLKSSSSILSKP 90
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 25.0 bits (52), Expect = 8.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 15 IDNSSAVPVAVGGSPTSANGSD 36
+D ++AVP++ GG+ T+ +D
Sbjct: 1221 MDRTTAVPISTGGTTTAPRSTD 1242
>SB_54002| Best HMM Match : POP1 (HMM E-Value=0)
Length = 886
Score = 25.0 bits (52), Expect = 8.8
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 20 AVPVAVGGSPTSANGSDVFLYDDSSMSDGSLYANQNTGAFTSDARVVRSNKSNRGKPRI 78
++P AV PT A GS ++ D S + Q A S+ V S G+ +
Sbjct: 488 SMPAAVNRWPTGAAGSSIWHRDARQQCKESKISEQKLNAMRSNLLVPGSKLELEGQQSV 546
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.131 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,238,986
Number of Sequences: 59808
Number of extensions: 122531
Number of successful extensions: 224
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 203
Number of HSP's gapped (non-prelim): 31
length of query: 94
length of database: 16,821,457
effective HSP length: 70
effective length of query: 24
effective length of database: 12,634,897
effective search space: 303237528
effective search space used: 303237528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 52 (25.0 bits)
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