GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002338-TA|BGIBMGA002338-PA|undefined
         (94 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   0.27 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   0.27 

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 5   DGVSGIRCQVIDNSSAVPVAVGGSPTS 31
           D   G+  + + NS A  VAVGGS  S
Sbjct: 475 DSSEGVDVEALKNSVATAVAVGGSARS 501


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 5   DGVSGIRCQVIDNSSAVPVAVGGSPTS 31
           D   G+  + + NS A  VAVGGS  S
Sbjct: 483 DSSEGVDVEALKNSVATAVAVGGSARS 509


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.131    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,706
Number of Sequences: 2123
Number of extensions: 3475
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 94
length of database: 516,269
effective HSP length: 54
effective length of query: 40
effective length of database: 401,627
effective search space: 16065080
effective search space used: 16065080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 42 (21.0 bits)