GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002336-TA|BGIBMGA002336-PA|undefined
         (86 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132152-1|AAD34740.1| 1181|Drosophila melanogaster unknown prot...    31   0.20 
AE013599-952|AAM71034.1| 1197|Drosophila melanogaster CG1516-PL,...    31   0.20 
AE013599-951|AAM71033.1| 1197|Drosophila melanogaster CG1516-PK,...    31   0.20 
AE013599-950|AAM71032.1| 1197|Drosophila melanogaster CG1516-PJ,...    31   0.20 
AE013599-949|AAG22289.2| 1197|Drosophila melanogaster CG1516-PI,...    31   0.20 
AE013599-948|AAM71031.1| 1181|Drosophila melanogaster CG1516-PG,...    31   0.20 
AE013599-947|AAM71030.1| 1181|Drosophila melanogaster CG1516-PE,...    31   0.20 
AE013599-946|AAF58886.1| 1181|Drosophila melanogaster CG1516-PD,...    31   0.20 
AE013599-945|AAF58887.1| 1181|Drosophila melanogaster CG1516-PB,...    31   0.20 
AE013599-944|AAF58885.1| 1181|Drosophila melanogaster CG1516-PA,...    31   0.20 
AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p pro...    28   1.9  
AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p pro...    28   1.9  
AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA...    28   1.9  
AY051698-1|AAK93122.1| 1637|Drosophila melanogaster LD24220p pro...    25   9.9  
AF029395-1|AAB96643.1| 1613|Drosophila melanogaster Genghis Khan...    25   9.9  
AE013599-3866|AAM68312.1|  469|Drosophila melanogaster CG30165-P...    25   9.9  
AE013599-3814|AAF47163.1| 1637|Drosophila melanogaster CG4012-PA...    25   9.9  

>AF132152-1|AAD34740.1| 1181|Drosophila melanogaster unknown
           protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-952|AAM71034.1| 1197|Drosophila melanogaster CG1516-PL,
           isoform L protein.
          Length = 1197

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-951|AAM71033.1| 1197|Drosophila melanogaster CG1516-PK,
           isoform K protein.
          Length = 1197

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-950|AAM71032.1| 1197|Drosophila melanogaster CG1516-PJ,
           isoform J protein.
          Length = 1197

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-949|AAG22289.2| 1197|Drosophila melanogaster CG1516-PI,
           isoform I protein.
          Length = 1197

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-948|AAM71031.1| 1181|Drosophila melanogaster CG1516-PG,
           isoform G protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-947|AAM71030.1| 1181|Drosophila melanogaster CG1516-PE,
           isoform E protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-946|AAF58886.1| 1181|Drosophila melanogaster CG1516-PD,
           isoform D protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-945|AAF58887.1| 1181|Drosophila melanogaster CG1516-PB,
           isoform B protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AE013599-944|AAF58885.1| 1181|Drosophila melanogaster CG1516-PA,
           isoform A protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 11/37 (29%), Positives = 24/37 (64%)

Query: 10  RNCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLA 46
           R+C+V ++ + + E    PR+P+  + K+++ A+ LA
Sbjct: 265 RDCSVQRRHQKVVEIAPAPRLPIEIRDKMTEAAVRLA 301


>AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p
           protein.
          Length = 1240

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 11  NCAVWQKWRSLTEALGNPRMPVRTKSKISKTAITLAIYGAKYCRYD-----EMKPRAKTK 65
           N ++ Q+  S+++A   P  P+   + +  TA+       +Y + D     EMK   K  
Sbjct: 602 NESLEQEEESVSQA--KPSKPLARNNSLDDTALQKLAAAMRYRKRDAAVKEEMKTPVKEP 659

Query: 66  CKRDENAKMIKR 77
           CK D++AK  +R
Sbjct: 660 CKCDQDAKQDER 671


>AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p protein.
          Length = 1430

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 14   VWQKWRSLTEALGNPRMPVRT-KSKISKTAITLAIYGAKYCRYDEMKPRAKTKCKRDENA 72
            VW+ WR +    G    PV+  K+K+ ++         +     ++K +AK + K +  A
Sbjct: 970  VWRLWRGVKRTAGTEVAPVKAKKAKVEESPKQKKTTIEETSAQKKVKAKAKVETKTEAKA 1029

Query: 73   KMIKRR 78
               KR+
Sbjct: 1030 IPTKRK 1035


>AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA
            protein.
          Length = 1430

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 14   VWQKWRSLTEALGNPRMPVRT-KSKISKTAITLAIYGAKYCRYDEMKPRAKTKCKRDENA 72
            VW+ WR +    G    PV+  K+K+ ++         +     ++K +AK + K +  A
Sbjct: 970  VWRLWRGVKRTAGTEVAPVKAKKAKVEESPKQKKTTIEETSAQKKVKAKAKVETKTEAKA 1029

Query: 73   KMIKRR 78
               KR+
Sbjct: 1030 IPTKRK 1035


>AY051698-1|AAK93122.1| 1637|Drosophila melanogaster LD24220p
           protein.
          Length = 1637

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 44  TLAIYGAKYCRYDEMKPRAKTKCKRDENAKMI-KRRQW 80
           T  +Y  K     EM  RA+T C R+E   ++   RQW
Sbjct: 122 TEKVYAMKILNKWEMLKRAETACFREERDVLVFGDRQW 159


>AF029395-1|AAB96643.1| 1613|Drosophila melanogaster Genghis Khan
           protein.
          Length = 1613

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 44  TLAIYGAKYCRYDEMKPRAKTKCKRDENAKMI-KRRQW 80
           T  +Y  K     EM  RA+T C R+E   ++   RQW
Sbjct: 98  TEKVYAMKILNKWEMLKRAETACFREERDVLVFGDRQW 135


>AE013599-3866|AAM68312.1|  469|Drosophila melanogaster CG30165-PA
           protein.
          Length = 469

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 24  ALGNPRMPVRTKSKISKTA 42
           A+  PR P+R KSK+S TA
Sbjct: 353 AIPMPRTPMRLKSKVSLTA 371


>AE013599-3814|AAF47163.1| 1637|Drosophila melanogaster CG4012-PA
           protein.
          Length = 1637

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 44  TLAIYGAKYCRYDEMKPRAKTKCKRDENAKMI-KRRQW 80
           T  +Y  K     EM  RA+T C R+E   ++   RQW
Sbjct: 122 TEKVYAMKILNKWEMLKRAETACFREERDVLVFGDRQW 159


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.128    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,031,419
Number of Sequences: 52641
Number of extensions: 117899
Number of successful extensions: 205
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 194
Number of HSP's gapped (non-prelim): 17
length of query: 86
length of database: 24,830,863
effective HSP length: 65
effective length of query: 21
effective length of database: 21,409,198
effective search space: 449593158
effective search space used: 449593158
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)