GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002336-TA|BGIBMGA002336-PA|undefined
         (86 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   2.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   5.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   5.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   8.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 49  GAKYCRYDEMKPRAKTK 65
           G+K   Y+E++ RA TK
Sbjct: 748 GSKSGEYEELRERAYTK 764


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 49  GAKYCRYDEMKPRAKTK 65
           G+K   Y+E++ RA TK
Sbjct: 744 GSKSGEYEELRERAYTK 760


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 60  PRAKTKCKRDENAKMIKRRQW 80
           P     C R  +AK I  +QW
Sbjct: 316 PARVMACMRSVDAKTISVQQW 336


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 60  PRAKTKCKRDENAKMIKRRQW 80
           P     C R  +AK I  +QW
Sbjct: 316 PARVMACMRSVDAKTISVQQW 336


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
          kinase foraging protein.
          Length = 678

 Score = 19.0 bits (37), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 60 PRAKTKCKRDENAKMIK 76
          PR +   KRD + ++IK
Sbjct: 78 PRCQLSNKRDRSRELIK 94


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.128    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,197
Number of Sequences: 429
Number of extensions: 733
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 86
length of database: 140,377
effective HSP length: 48
effective length of query: 38
effective length of database: 119,785
effective search space:  4551830
effective search space used:  4551830
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.0 bits)
S2: 37 (19.0 bits)