GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002335-TA|BGIBMGA002335-PA|IPR008504|Protein of unknown
function DUF786
         (113 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    24   1.5  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   1.5  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    22   4.6  

>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 29  VEYCRTSMAALSGSTAGVLG--LTGLND 54
           +E+ R + A LSG   GV+G  +TG+ D
Sbjct: 282 MEHFRGARAILSGPAGGVVGYAVTGMRD 309


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 29  VEYCRTSMAALSGSTAGVLG--LTGLND 54
           +E+ R + A LSG   GV+G  +TG+ D
Sbjct: 282 MEHFRGARAILSGPAGGVVGYAVTGMRD 309


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 55  FAFYVFAVVMLWIMFLVK 72
           FA+ VF + M WI +  K
Sbjct: 580 FAYMVFMMFMKWIAYTAK 597


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.329    0.138    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,532
Number of Sequences: 2123
Number of extensions: 3454
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 113
length of database: 516,269
effective HSP length: 56
effective length of query: 57
effective length of database: 397,381
effective search space: 22650717
effective search space used: 22650717
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 43 (21.4 bits)