GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002335-TA|BGIBMGA002335-PA|IPR008504|Protein of unknown
function DUF786
         (113 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3686|AAF56378.1|  113|Drosophila melanogaster CG11781-P...   145   1e-35
AY119134-1|AAM50994.1|  113|Drosophila melanogaster RE35789p pro...   144   3e-35
AY094676-1|AAM11029.1|  266|Drosophila melanogaster GH04896p pro...    30   0.61 
AE013599-963|AAM71039.1|  266|Drosophila melanogaster CG30008-PA...    30   0.61 
BT003240-1|AAO24997.1|  561|Drosophila melanogaster LD47795p pro...    29   1.1  
AE014296-698|AAS64961.1|  531|Drosophila melanogaster CG12006-PB...    29   1.1  
AE014296-697|AAF47795.2|  561|Drosophila melanogaster CG12006-PA...    29   1.1  
AY084161-1|AAL89899.1|  473|Drosophila melanogaster RE36938p pro...    29   1.9  
AE014297-2655|AAF55662.2|  473|Drosophila melanogaster CG3734-PA...    29   1.9  
AY061182-1|AAL28730.1|  322|Drosophila melanogaster LD14839p pro...    27   7.5  
AE014297-3183|AAN13911.1|  322|Drosophila melanogaster CG6921-PC...    27   7.5  
AE014297-3182|AAN13910.2|  322|Drosophila melanogaster CG6921-PB...    27   7.5  
AE014297-3181|AAF56018.1|  322|Drosophila melanogaster CG6921-PA...    27   7.5  
AY122067-1|AAM52579.1|  331|Drosophila melanogaster AT09608p pro...    26   10.0 
AE013599-470|AAF59216.3|  331|Drosophila melanogaster CG30491-PA...    26   10.0 

>AE014297-3686|AAF56378.1|  113|Drosophila melanogaster CG11781-PA
           protein.
          Length = 113

 Score =  145 bits (352), Expect = 1e-35
 Identities = 66/113 (58%), Positives = 81/113 (71%)

Query: 1   MSAVTKFKENKPEPVAYSEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNDFAFYVF 60
           M+ V   +    E +AYSE A+RNN   VEYCRTSMAA+SG  AG+LGL+G   F FY  
Sbjct: 1   MNRVKTTQSKTGEIIAYSEGAIRNNISAVEYCRTSMAAISGCAAGILGLSGTLGFLFYFL 60

Query: 61  AVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
           +V +LWI+ LVK G  W K+FI R+++LTN F G L TYVLFWTF+YGMVHVY
Sbjct: 61  SVFVLWILVLVKSGTQWRKFFINRRNLLTNQFMGGLCTYVLFWTFLYGMVHVY 113


>AY119134-1|AAM50994.1|  113|Drosophila melanogaster RE35789p
           protein.
          Length = 113

 Score =  144 bits (348), Expect = 3e-35
 Identities = 65/113 (57%), Positives = 80/113 (70%)

Query: 1   MSAVTKFKENKPEPVAYSEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNDFAFYVF 60
           M+ V   +    E +AYSE A+RNN   VEYCRTSMAA+SG  AG+LGL+G   F FY  
Sbjct: 1   MNRVKTTQSKTGEIIAYSEGAIRNNISAVEYCRTSMAAISGCAAGILGLSGTLGFLFYFL 60

Query: 61  AVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
           +V +LWI+ LVK G  W K+FI R+++LTN F G L TYVLFWTF+YGM HVY
Sbjct: 61  SVFVLWILVLVKSGTQWRKFFINRRNLLTNQFMGGLCTYVLFWTFLYGMAHVY 113


>AY094676-1|AAM11029.1|  266|Drosophila melanogaster GH04896p
          protein.
          Length = 266

 Score = 30.3 bits (65), Expect = 0.61
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 57 FYVFAVVMLWIMFLVKVGPH---WSKYFITRQSVLTNGF 92
          +Y+  V++L++ F+ K GPH   W K +  ++ +L + F
Sbjct: 23 WYMITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNF 61


>AE013599-963|AAM71039.1|  266|Drosophila melanogaster CG30008-PA
          protein.
          Length = 266

 Score = 30.3 bits (65), Expect = 0.61
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 57 FYVFAVVMLWIMFLVKVGPH---WSKYFITRQSVLTNGF 92
          +Y+  V++L++ F+ K GPH   W K +  ++ +L + F
Sbjct: 23 WYMITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNF 61


>BT003240-1|AAO24997.1|  561|Drosophila melanogaster LD47795p
           protein.
          Length = 561

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 49  LTGLNDFAFYVFAVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYG 108
           L+  +D+ F+V+     W +FL+ V   W   F T    L N    +L T  L +   YG
Sbjct: 93  LSAYSDYRFFVWTGKRKWALFLILVPWFW---FYTGSRTLANTLEASLTTIALSYFPWYG 149

Query: 109 MVHVY 113
               Y
Sbjct: 150 ESTAY 154


>AE014296-698|AAS64961.1|  531|Drosophila melanogaster CG12006-PB,
           isoform B protein.
          Length = 531

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 49  LTGLNDFAFYVFAVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYG 108
           L+  +D+ F+V+     W +FL+ V   W   F T    L N    +L T  L +   YG
Sbjct: 93  LSAYSDYRFFVWTGKRKWALFLILVPWFW---FYTGSRTLANTLEASLTTIALSYFPWYG 149

Query: 109 MVHVY 113
               Y
Sbjct: 150 ESTAY 154


>AE014296-697|AAF47795.2|  561|Drosophila melanogaster CG12006-PA,
           isoform A protein.
          Length = 561

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 49  LTGLNDFAFYVFAVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYG 108
           L+  +D+ F+V+     W +FL+ V   W   F T    L N    +L T  L +   YG
Sbjct: 93  LSAYSDYRFFVWTGKRKWALFLILVPWFW---FYTGSRTLANTLEASLTTIALSYFPWYG 149

Query: 109 MVHVY 113
               Y
Sbjct: 150 ESTAY 154


>AY084161-1|AAL89899.1|  473|Drosophila melanogaster RE36938p
           protein.
          Length = 473

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 74  GPHWSKYFITRQSVLTNGFFGALFTYV 100
           G  +S  FI+ Q  +TN FFG LF  V
Sbjct: 384 GSEYSNEFISNQVSITNQFFGGLFPNV 410


>AE014297-2655|AAF55662.2|  473|Drosophila melanogaster CG3734-PA
           protein.
          Length = 473

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 74  GPHWSKYFITRQSVLTNGFFGALFTYV 100
           G  +S  FI+ Q  +TN FFG LF  V
Sbjct: 384 GSEYSNEFISNQVSITNQFFGGLFPNV 410


>AY061182-1|AAL28730.1|  322|Drosophila melanogaster LD14839p
          protein.
          Length = 322

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 9/21 (42%), Positives = 17/21 (80%)

Query: 59 VFAVVMLWIMFLVKVGPHWSK 79
          V AVV++++ F++K+GP + K
Sbjct: 35 VVAVVLVYLAFVLKIGPEYMK 55


>AE014297-3183|AAN13911.1|  322|Drosophila melanogaster CG6921-PC,
          isoform C protein.
          Length = 322

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 9/21 (42%), Positives = 17/21 (80%)

Query: 59 VFAVVMLWIMFLVKVGPHWSK 79
          V AVV++++ F++K+GP + K
Sbjct: 35 VVAVVLVYLAFVLKIGPEYMK 55


>AE014297-3182|AAN13910.2|  322|Drosophila melanogaster CG6921-PB,
          isoform B protein.
          Length = 322

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 9/21 (42%), Positives = 17/21 (80%)

Query: 59 VFAVVMLWIMFLVKVGPHWSK 79
          V AVV++++ F++K+GP + K
Sbjct: 35 VVAVVLVYLAFVLKIGPEYMK 55


>AE014297-3181|AAF56018.1|  322|Drosophila melanogaster CG6921-PA,
          isoform A protein.
          Length = 322

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 9/21 (42%), Positives = 17/21 (80%)

Query: 59 VFAVVMLWIMFLVKVGPHWSK 79
          V AVV++++ F++K+GP + K
Sbjct: 35 VVAVVLVYLAFVLKIGPEYMK 55


>AY122067-1|AAM52579.1|  331|Drosophila melanogaster AT09608p
           protein.
          Length = 331

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 82  ITRQSVLTNGFFGALFTYVLFWTFI 106
           I R     N FF  LF   LFW F+
Sbjct: 243 IIRHMGFFNNFFAGLFVKPLFWPFV 267


>AE013599-470|AAF59216.3|  331|Drosophila melanogaster CG30491-PA
           protein.
          Length = 331

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 82  ITRQSVLTNGFFGALFTYVLFWTFI 106
           I R     N FF  LF   LFW F+
Sbjct: 243 IIRHMGFFNNFFAGLFVKPLFWPFV 267


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.329    0.138    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,801,910
Number of Sequences: 52641
Number of extensions: 151078
Number of successful extensions: 429
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 417
Number of HSP's gapped (non-prelim): 15
length of query: 113
length of database: 24,830,863
effective HSP length: 75
effective length of query: 38
effective length of database: 20,882,788
effective search space: 793545944
effective search space used: 793545944
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 55 (26.2 bits)