BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002335-TA|BGIBMGA002335-PA|IPR008504|Protein of unknown
function DUF786
(113 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036702-9|AAR85906.1| 111|Caenorhabditis elegans Hypothetical ... 83 6e-17
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 29 0.59
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 29 0.59
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 29 0.59
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 29 0.59
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 29 0.59
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 29 0.59
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 29 0.59
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 29 0.59
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 29 0.59
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 29 0.59
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 29 0.59
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 29 0.59
U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate trans... 29 1.0
U67952-1|AAB07577.2| 414|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical ... 27 2.4
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 27 2.4
AF022969-2|AAB69893.2| 354|Caenorhabditis elegans Hypothetical ... 27 3.1
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 26 5.5
AL110479-2|CAB54350.2| 438|Caenorhabditis elegans Hypothetical ... 26 5.5
AF016685-16|AAG24152.2| 328|Caenorhabditis elegans Serpentine r... 26 5.5
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho... 26 7.2
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho... 26 7.2
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh... 26 7.2
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p... 26 7.2
AF068720-2|AAC17787.1| 346|Caenorhabditis elegans Seven tm rece... 26 7.2
>AF036702-9|AAR85906.1| 111|Caenorhabditis elegans Hypothetical
protein F33D4.7 protein.
Length = 111
Score = 82.6 bits (195), Expect = 6e-17
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 8 KENKPEPVAYSEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNDFAFYVFAVVMLWI 67
K K Y+ AA+ NN +E+ RT + +G AG+LGLTG F Y +V + +
Sbjct: 7 KAEKKNDECYNTAAITNNVEALEFGRTCQSCAAGMAAGILGLTGFQGFILYFISVGIQAV 66
Query: 68 MFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
++ VK +W YF R S T L T+VL W F YGMVHVY
Sbjct: 67 IWNVKSQGNWLSYFPERNS-FTWSHGNGLLTFVLLWVFFYGMVHVY 111
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 804 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 836
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 803 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 835
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 814 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 846
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 809 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 841
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 798 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 830
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 820 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 852
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 804 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 836
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 803 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 835
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 814 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 846
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 809 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 841
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 798 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 830
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 29.5 bits (63), Expect = 0.59
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 77 WSKYFITRQSVLTNGFFGALFTYVLFWTFIYGMVHVY 113
W+ F R + + +G+ GA+ TY+LF FI+G + V+
Sbjct: 820 WTMVF--RNAFVLDGYTGAIATYILF--FIFGSLSVF 852
>U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate
transporter family protein4 protein.
Length = 499
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 34 TSMAALSGSTAGVLGLTGLNDFAFYVFAVVMLWIMFLVKVGP 75
TS+A+L TAG LG+ + + F V L I+ + + P
Sbjct: 68 TSLASLDSGTAGRLGMVSMIYYTLTTFFAVFLGIVLVSVIKP 109
>U67952-1|AAB07577.2| 414|Caenorhabditis elegans Hypothetical
protein F39B3.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 77 WSKYFITRQSVLTNGFFGALFTY 99
W+ YFI S L NG+F A F +
Sbjct: 20 WALYFIQMLSHLLNGYFTAFFVF 42
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical
protein F42E11.1 protein.
Length = 1266
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 65 LWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYG 108
L++MF++ G W +T V T+G T+ +FW I G
Sbjct: 285 LFLMFVLMAGAFWYGAILTSYGVATSG-----TTFGVFWAVILG 323
>AF045639-8|AAC02566.1| 649|Caenorhabditis elegans Hypothetical
protein B0212.1 protein.
Length = 649
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 42 STAGVLGLTGLNDFAFYVFAVVMLWIMFLVKVG 74
S AG++GLTG + + F ++ + I L++VG
Sbjct: 503 SVAGLVGLTGEKQWTNFSFILLFVHIFRLIQVG 535
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 39 LSGSTA-GVLGLTGLNDFAFYVFAVVMLWIMFLVKVGPHWSKYFITR 84
++GST G+LG F++ V+ + +L+ + P+W Y + R
Sbjct: 145 MAGSTTFGMLGDRIGRKKVFFLAIVIQITCAYLIAIAPYWWLYALAR 191
>AF022969-2|AAB69893.2| 354|Caenorhabditis elegans Hypothetical
protein C29G2.4 protein.
Length = 354
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 92 FFGALFTYVLFWTFIYGM 109
F G F YV+F FIYGM
Sbjct: 149 FRGRTFNYVIFLLFIYGM 166
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 8 KENKPEPVAYSEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNDFAFYVFAVVMLW- 66
++N PEP+A ++ +R ++V + A++ G +G+ G + Y+ A L+
Sbjct: 49 RDNDPEPLAGVKSDIR-TGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFM 107
Query: 67 -IMFLVKV 73
I+FL+++
Sbjct: 108 VILFLLEI 115
>AL110479-2|CAB54350.2| 438|Caenorhabditis elegans Hypothetical
protein Y105C5B.3 protein.
Length = 438
Score = 26.2 bits (55), Expect = 5.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 101 LFWTFIYGMVHV 112
LFW+F YG VH+
Sbjct: 221 LFWSFTYGFVHI 232
>AF016685-16|AAG24152.2| 328|Caenorhabditis elegans Serpentine
receptor, class x protein1 protein.
Length = 328
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 57 FYVFAVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLF 102
FY F+ +M + ++ VG H + +T + N A F Y+LF
Sbjct: 238 FYTFSWIMFRVFPIIFVGRHIEWFILTSMCHVFNCSANA-FVYILF 282
>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform b protein.
Length = 1294
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 18 SEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNDFAFYVFAVVMLW 66
SE AL+ +V+E C + +A + + +L G N F+ V ++
Sbjct: 127 SEIALKGLMIVLELCLSQPSARDDAFSALLETLGYNTVTFWKAVVPQIY 175
>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform a protein.
Length = 1331
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 18 SEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNDFAFYVFAVVMLW 66
SE AL+ +V+E C + +A + + +L G N F+ V ++
Sbjct: 164 SEIALKGLMIVLELCLSQPSARDDAFSALLETLGYNTVTFWKAVVPQIY 212
>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative
trehalose 6-phosphatesynthase protein.
Length = 1331
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 18 SEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNDFAFYVFAVVMLW 66
SE AL+ +V+E C + +A + + +L G N F+ V ++
Sbjct: 164 SEIALKGLMIVLELCLSQPSARDDAFSALLETLGYNTVTFWKAVVPQIY 212
>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1331
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 18 SEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNDFAFYVFAVVMLW 66
SE AL+ +V+E C + +A + + +L G N F+ V ++
Sbjct: 164 SEIALKGLMIVLELCLSQPSARDDAFSALLETLGYNTVTFWKAVVPQIY 212
>AF068720-2|AAC17787.1| 346|Caenorhabditis elegans Seven tm
receptor protein 240 protein.
Length = 346
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 80 YFITRQSVLTNGFFGALFTYVLFWTFIYGMVHV 112
Y I R S + GF+ L Y+ + IY +V +
Sbjct: 28 YLILRHSPKSLGFYKYLMIYIALFEMIYAIVDI 60
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.329 0.138 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,566,074
Number of Sequences: 27539
Number of extensions: 86454
Number of successful extensions: 322
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 297
Number of HSP's gapped (non-prelim): 27
length of query: 113
length of database: 12,573,161
effective HSP length: 72
effective length of query: 41
effective length of database: 10,590,353
effective search space: 434204473
effective search space used: 434204473
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 53 (25.4 bits)
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