BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002334-TA|BGIBMGA002334-PA|undefined
(92 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 0.53
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 23 0.69
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 23 0.69
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 22 1.2
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 2.1
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 20 3.7
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 20 4.9
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 19 6.5
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 19 6.5
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.0 bits (47), Expect = 0.53
Identities = 13/63 (20%), Positives = 28/63 (44%)
Query: 14 MIYIFGTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYFVMAMFSVGVNVITTGT 73
++ +FG L+I + ++ +V + + ++ Y FL +Y + V T
Sbjct: 600 LLLMFGVSFLLITQTIFIICVIVQSEQIAWLHLLYIFLVGIMYAADVFYICHVCCSTIHE 659
Query: 74 ISK 76
+SK
Sbjct: 660 VSK 662
Score = 21.8 bits (44), Expect = 1.2
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 2 FLNHEQVLRYFKMIYIFGTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYFVM 59
FLN Q+ Y + IFG V L+ YN++ ++ +F+ +Y V+
Sbjct: 10 FLNSLQI--YLQHNQIFGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSYWLYLVL 65
Score = 21.8 bits (44), Expect = 1.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 54 SVYFVMAMFSVGVNVITTGT---ISKRQSVCTLFTVVWSC 90
SV+F+ +F + VN+ T +SK ++ CTL T + C
Sbjct: 378 SVFFLSEIFGL-VNLKYRETYFRLSKTKTFCTLVTALVYC 416
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 22.6 bits (46), Expect = 0.69
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 34 TLVDTYNLVNFYVWYAFLYLSVYFVMAMFS 63
TLV Y FY+ + F +L V ++AMFS
Sbjct: 312 TLVVIYTFNLFYLCFCFYWLLV--MVAMFS 339
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 22.6 bits (46), Expect = 0.69
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 34 TLVDTYNLVNFYVWYAFLYLSVYFVMAMFS 63
TLV Y FY+ + F +L V ++AMFS
Sbjct: 268 TLVVIYTFNLFYLCFCFYWLLV--MVAMFS 295
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory
receptor candidate 3 protein.
Length = 398
Score = 21.8 bits (44), Expect = 1.2
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 2 FLNHEQVLRYFKMIYIFGTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYFVM 59
FLN Q+ Y + IFG V L+ YN++ ++ +F+ +Y V+
Sbjct: 28 FLNSLQI--YLQHNQIFGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSYWLYLVL 83
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 21.0 bits (42), Expect = 2.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 20 TVC-LMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYFVM 59
T C L L+L LV + +NF V LY+++Y ++
Sbjct: 202 TACRLFKIDNSLILDLLV--FITINFVVLLGDLYVTLYIIL 240
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 20.2 bits (40), Expect = 3.7
Identities = 5/8 (62%), Positives = 8/8 (100%)
Query: 83 LFTVVWSC 90
LFT++W+C
Sbjct: 284 LFTILWNC 291
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 19.8 bits (39), Expect = 4.9
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 22 CLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSV 55
C T L+ V TY L Y W +FL +SV
Sbjct: 530 CFGFITKQLIFMIFV-TYQL---YCWSSFLKISV 559
Score = 19.4 bits (38), Expect = 6.5
Identities = 10/51 (19%), Positives = 23/51 (45%)
Query: 31 VLGTLVDTYNLVNFYVWYAFLYLSVYFVMAMFSVGVNVITTGTISKRQSVC 81
+LG ++T+N + Y + S V++ + + V+ G ++C
Sbjct: 621 ILGETIETWNKLFGYQILLITFQSGLNVVSCINFPLGVLDRGNFDIEIALC 671
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 19.4 bits (38), Expect = 6.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 51 LYLSVYFVMAMFSVGVNVIT 70
+Y+ VY ++ +F VN T
Sbjct: 255 IYMIVYIIVVIFWYTVNAST 274
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 19.4 bits (38), Expect = 6.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 51 LYLSVYFVMAMFSVGVNVIT 70
+Y+ VY ++ +F VN T
Sbjct: 255 IYMIVYIIVVIFWYTVNAST 274
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.336 0.143 0.465
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,312
Number of Sequences: 317
Number of extensions: 876
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 92
length of database: 114,650
effective HSP length: 47
effective length of query: 45
effective length of database: 99,751
effective search space: 4488795
effective search space used: 4488795
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.7 bits)
S2: 37 (19.0 bits)
- SilkBase 1999-2023 -