Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002334-TA|BGIBMGA002334-PA|undefined
(92 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 27 0.44
SPAC11H11.02c |mug162||sequence orphan|Schizosaccharomyces pombe... 26 0.77
SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyc... 26 0.77
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 24 3.1
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 24 3.1
SPCC553.12c ||SPCC794.13|conserved fungal protein|Schizosaccharo... 24 3.1
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 23 5.5
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 23 5.5
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 23 7.2
SPCC777.13 |vps35||retromer complex subunit Vps35|Schizosaccharo... 23 7.2
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 23 9.5
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 23 9.5
SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom... 23 9.5
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 27.1 bits (57), Expect = 0.44
Identities = 11/53 (20%), Positives = 27/53 (50%)
Query: 14 MIYIFGTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYFVMAMFSVGV 66
+++ + +CL+ + ML +G + ++ F F + +YFV +F + +
Sbjct: 643 LVFEYILICLIFSQFMLAMGNRPRSCRVLLFISTALFSIIMIYFVFCVFYISL 695
>SPAC11H11.02c |mug162||sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 0.77
Identities = 9/50 (18%), Positives = 26/50 (52%)
Query: 41 LVNFYVWYAFLYLSVYFVMAMFSVGVNVITTGTISKRQSVCTLFTVVWSC 90
++N Y+W + + + + + V ++ TG++ + + + F ++ SC
Sbjct: 184 VINLYIWIKLIDSKDFVLGFLAGLSVLLLNTGSLITAKPLISYFNLLTSC 233
>SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 0.77
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 2 FLNHEQVLRYFKMIYIFGTVCLMIATGMLVLGTLVD 37
F+N V Y +M +I T+ ++ G ++LG ++D
Sbjct: 208 FINIFGVKGYGEMEFIMSTIKVVAMCGFIILGIIID 243
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 24.2 bits (50), Expect = 3.1
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 16 YIFGTVCLMIATGMLVLGTLVDT 38
Y + +C++I + + +LG+L++T
Sbjct: 350 YYYYAICILIISVVSILGSLIET 372
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 24.2 bits (50), Expect = 3.1
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 20 TVCLMIATGMLVLGTLVDTYNLVNFYVWYAFL-YLSVYF 57
T+ L ATG L L +V + ++ W+ ++S+ F
Sbjct: 728 TIALQTATGSLKLSAIVGLTVFLQYWYWFPLTHFMSLSF 766
>SPCC553.12c ||SPCC794.13|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 521
Score = 24.2 bits (50), Expect = 3.1
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 19 GTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVY 56
GTV L +L T +Y LV + Y L L VY
Sbjct: 307 GTVSLCNLVSSWILNTKTHSYALVTVFKLYFELTLQVY 344
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 23.4 bits (48), Expect = 5.5
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 18 FGTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYF 57
F + ++ T +L G ++ N V +Y+ FL+L ++
Sbjct: 1044 FSIIPFILLTEILRTGKMLPRLNDVEYYINNVFLFLLSFY 1083
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 23.4 bits (48), Expect = 5.5
Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 32 LGTLVDTYNLVNFYVWYAFLYLSVYFVMAMFSVGVNV-ITTGTISKRQSVC 81
LGT + + +++FY +A +L+ F+M + + V + G + +C
Sbjct: 1248 LGTQLPFFRMLSFYYAHAGFHLNNVFIMISMQLLMLVFVNLGAMYHTVEIC 1298
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 23.0 bits (47), Expect = 7.2
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Query: 16 YIFGTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYFVMAMFSVGVNVITTGTIS 75
YI +CL + +L+L L F Y+ Y SV++++ + V +
Sbjct: 163 YIAFPICLFVINHILIL--------LGYFQCSYSVFYASVFYILLGVFIRVFYLVNKEKF 214
Query: 76 KRQSVCTLFTVVWSCC 91
+++ + LF+ + C
Sbjct: 215 EKKELAFLFSSIVVAC 230
>SPCC777.13 |vps35||retromer complex subunit
Vps35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 23.0 bits (47), Expect = 7.2
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 10 RYFKMIYIFGTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYFVMAMFSVGVNVI 69
+Y+++ Y+F L + G L+ L T+NL++ Y + V + M +VG +
Sbjct: 10 QYYEL-YMFNMESLRLLGGTLLETHLNGTHNLMDLYELVQYAGSIVPRLYLMITVGSAYL 68
Query: 70 TT 71
T
Sbjct: 69 ET 70
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 22.6 bits (46), Expect = 9.5
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 4 NHEQVLRYFKMIYIFGTVCLMIATGMLVLGTLVDTYNLVN 43
N E L YF + F LM G+ LG+ YN N
Sbjct: 876 NSETNLNYFATLDAFVKSPLMSFDGLGELGSTDQRYNFFN 915
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 22.6 bits (46), Expect = 9.5
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 3 LNHEQVLRYFKMIYIFGTVCLMIATGML 30
L+ E++ Y K +Y+ +CL I TG +
Sbjct: 194 LSIEKIREYHKEMYVPSNICL-IVTGCI 220
>SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 431
Score = 22.6 bits (46), Expect = 9.5
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 38 TYNLVNFYV-WYAFLYLSVYFVMAMFSVGVNVITTGTISKRQSVCTLFTVVW 88
T + F V W+A ++ +V VM + +G + + Q T+VW
Sbjct: 310 TRQRIKFKVSWFAMIFANVGLVMDVQELGRAIDSKAVCIVGQVCGVTITIVW 361
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.336 0.143 0.465
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,373
Number of Sequences: 5004
Number of extensions: 13068
Number of successful extensions: 72
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 62
Number of HSP's gapped (non-prelim): 13
length of query: 92
length of database: 2,362,478
effective HSP length: 62
effective length of query: 30
effective length of database: 2,052,230
effective search space: 61566900
effective search space used: 61566900
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.7 bits)
S2: 46 (22.6 bits)
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