GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002334-TA|BGIBMGA002334-PA|undefined
         (92 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ508602-1|CAD48420.1|  771|Homo sapiens Na+/Ca2+ exchanger isof...    27   6.9  
AJ304853-1|CAC40985.1|  924|Homo sapiens sodium/calcium exchange...    27   6.9  
AJ304852-1|CAC40984.1|  925|Homo sapiens sodium/calcium exchange...    27   6.9  
AF510503-1|AAN60792.1|  620|Homo sapiens Na+/Ca2+ exchanger isof...    27   6.9  
AF510502-1|AAN60791.1|  927|Homo sapiens Na+/Ca2+ exchanger isof...    27   6.9  
AF510501-1|AAN60790.1|  921|Homo sapiens Na+/Ca2+ exchanger isof...    27   6.9  
AF508982-1|AAM90955.1|  927|Homo sapiens Na+/Ca2+ exchanger isof...    27   6.9  

>AJ508602-1|CAD48420.1|  771|Homo sapiens Na+/Ca2+ exchanger
          isoform 4 protein.
          Length = 771

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 47 WYAFLYLSVYFVMAMFSVGVNVITTGTIS 75
          W  F Y+ +Y ++A+FS GV  +  G ++
Sbjct: 59 WSIFAYIWLYMILAVFSPGVVQVWEGLLT 87


>AJ304853-1|CAC40985.1|  924|Homo sapiens sodium/calcium exchanger
           SCL8A3 protein.
          Length = 924

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 47  WYAFLYLSVYFVMAMFSVGVNVITTGTIS 75
           W  F Y+ +Y ++A+FS GV  +  G ++
Sbjct: 209 WSIFAYIWLYMILAVFSPGVVQVWEGLLT 237


>AJ304852-1|CAC40984.1|  925|Homo sapiens sodium/calcium exchanger
           SCL8A3 protein.
          Length = 925

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 47  WYAFLYLSVYFVMAMFSVGVNVITTGTIS 75
           W  F Y+ +Y ++A+FS GV  +  G ++
Sbjct: 209 WSIFAYIWLYMILAVFSPGVVQVWEGLLT 237


>AF510503-1|AAN60792.1|  620|Homo sapiens Na+/Ca2+ exchanger isoform
           3 splice variant 4 protein.
          Length = 620

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 47  WYAFLYLSVYFVMAMFSVGVNVITTGTIS 75
           W  F Y+ +Y ++A+FS GV  +  G ++
Sbjct: 209 WSIFAYIWLYMILAVFSPGVVQVWEGLLT 237


>AF510502-1|AAN60791.1|  927|Homo sapiens Na+/Ca2+ exchanger isoform
           3 splice variant 3 protein.
          Length = 927

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 47  WYAFLYLSVYFVMAMFSVGVNVITTGTIS 75
           W  F Y+ +Y ++A+FS GV  +  G ++
Sbjct: 209 WSIFAYIWLYMILAVFSPGVVQVWEGLLT 237


>AF510501-1|AAN60790.1|  921|Homo sapiens Na+/Ca2+ exchanger isoform
           3 splice variant 2 protein.
          Length = 921

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 47  WYAFLYLSVYFVMAMFSVGVNVITTGTIS 75
           W  F Y+ +Y ++A+FS GV  +  G ++
Sbjct: 209 WSIFAYIWLYMILAVFSPGVVQVWEGLLT 237


>AF508982-1|AAM90955.1|  927|Homo sapiens Na+/Ca2+ exchanger isoform
           3 protein.
          Length = 927

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 47  WYAFLYLSVYFVMAMFSVGVNVITTGTIS 75
           W  F Y+ +Y ++A+FS GV  +  G ++
Sbjct: 209 WSIFAYIWLYMILAVFSPGVVQVWEGLLT 237


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.336    0.143    0.465 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,532,687
Number of Sequences: 224733
Number of extensions: 434229
Number of successful extensions: 1344
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1337
Number of HSP's gapped (non-prelim): 7
length of query: 92
length of database: 73,234,838
effective HSP length: 70
effective length of query: 22
effective length of database: 57,503,528
effective search space: 1265077616
effective search space used: 1265077616
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.7 bits)
S2: 57 (27.1 bits)