GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002332-TA|BGIBMGA002332-PA|undefined
         (256 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.99 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.0  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%)

Query: 194 FLNIVFAFFLVIAICFECVLYDDRCIFGEMDWLSSSALLVL 234
           FL I+F FF +I +    +LY   CI  + + +S++A LVL
Sbjct: 238 FLTIIFLFF-IIPLIILLILY---CIIAK-NLMSNAATLVL 273


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 186 VQVFVWVLFL--NIVFAFFLVIAICFECVLYD 215
           V VF WV+ L  N  F   +++    E V+ D
Sbjct: 102 VNVFFWVIILMSNYAFTRIILLKSVLEIVIID 133


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 174 LLFGTLTNSEGMVQVFVWVLFLNIVFAFFL 203
           LLF TLT+ E      V ++    +F  F+
Sbjct: 164 LLFKTLTHDEPRKSSLVQLILTQAIFLMFV 193


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 174 LLFGTLTNSEGMVQVFVWVLFLNIVFAFFL 203
           LLF TLT+ E      V ++    +F  F+
Sbjct: 90  LLFKTLTHDEPRKSSLVQLILTQAIFLMFV 119


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.335    0.145    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,438
Number of Sequences: 317
Number of extensions: 2115
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 4
length of query: 256
length of database: 114,650
effective HSP length: 55
effective length of query: 201
effective length of database: 97,215
effective search space: 19540215
effective search space used: 19540215
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.7 bits)
S2: 42 (21.0 bits)