Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002332-TA|BGIBMGA002332-PA|undefined
(256 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069723-1|AAL39868.1| 492|Drosophila melanogaster LP02895p pro... 31 1.6
AE014296-1|AAF47322.2| 492|Drosophila melanogaster CG32475-PA p... 31 1.6
AY113535-1|AAM29540.1| 165|Drosophila melanogaster RE61190p pro... 31 2.1
AE014297-2193|AAF55304.1| 165|Drosophila melanogaster CG10311-P... 31 2.1
AY071700-1|AAL49322.1| 150|Drosophila melanogaster RH17222p pro... 30 3.6
AE013599-2782|AAF57627.1| 150|Drosophila melanogaster CG15083-P... 30 3.6
U78084-1|AAB53369.1| 527|Drosophila melanogaster presenilin pro... 29 6.3
U77934-1|AAB61139.1| 541|Drosophila melanogaster presenilin hom... 29 6.3
AY061316-1|AAL28864.1| 541|Drosophila melanogaster LD23505p pro... 29 6.3
AY061243-1|AAL28791.1| 249|Drosophila melanogaster LD18367p pro... 29 6.3
AF093402-2|AAD52708.1| 527|Drosophila melanogaster presenilin a... 29 6.3
AF093402-1|AAD52707.1| 541|Drosophila melanogaster presenilin a... 29 6.3
AF084184-2|AAC33128.1| 527|Drosophila melanogaster presenilin s... 29 6.3
AF084184-1|AAC33129.1| 541|Drosophila melanogaster presenilin l... 29 6.3
AF017024-1|AAD01610.1| 541|Drosophila melanogaster presenilin p... 29 6.3
AE014297-1008|AAO41529.1| 249|Drosophila melanogaster CG32939-P... 29 6.3
AE014297-1002|AAG22138.1| 249|Drosophila melanogaster CG18542-P... 29 6.3
AE014296-3364|AAN12132.1| 527|Drosophila melanogaster CG18803-P... 29 6.3
AE014296-3363|AAF51598.1| 541|Drosophila melanogaster CG18803-P... 29 6.3
BT022543-1|AAY54959.1| 268|Drosophila melanogaster IP07869p pro... 29 8.3
AE014134-1986|AAF53030.1| 251|Drosophila melanogaster CG14070-P... 29 8.3
>AY069723-1|AAL39868.1| 492|Drosophila melanogaster LP02895p
protein.
Length = 492
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/120 (18%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 127 CLMAGGVLLCLIFVIVLYPNKAF-SHIGSLIRSGVTTMSVFFMLMGVVLLFGTLTNSEGM 185
CL+ + + ++ ++ L ++ S G I++ M + + L+ + L S
Sbjct: 221 CLLIAILSMFIVLMVYLMCSEMRNSFYGVAIKAYAICMILGYALLAYLTLHNPANLSNAA 280
Query: 186 VQVFVWVLFLNIVFAFFLVIAICFECVLYDDRCIFGE-MDWLSSSALLVLIITYLFRIYF 244
++ + +N+V +F+++ I F+ L +F + M WL + ++++ + + F + F
Sbjct: 281 CRILPSLALMNLVLSFYILSFIAFKLYLSFYGVVFTKLMFWLIFTPIVLVAVGWSFFVGF 340
>AE014296-1|AAF47322.2| 492|Drosophila melanogaster CG32475-PA
protein.
Length = 492
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/120 (18%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 127 CLMAGGVLLCLIFVIVLYPNKAF-SHIGSLIRSGVTTMSVFFMLMGVVLLFGTLTNSEGM 185
CL+ + + ++ ++ L ++ S G I++ M + + L+ + L S
Sbjct: 221 CLLIAILSMFIVLMVYLMCSEMRNSFYGVAIKAYAICMILGYALLAYLTLHNPANLSNAA 280
Query: 186 VQVFVWVLFLNIVFAFFLVIAICFECVLYDDRCIFGE-MDWLSSSALLVLIITYLFRIYF 244
++ + +N+V +F+++ I F+ L +F + M WL + ++++ + + F + F
Sbjct: 281 CRILPSLALMNLVLSFYILSFIAFKLYLSFYGVVFTKLMFWLIFTPIVLVAVGWSFFVGF 340
>AY113535-1|AAM29540.1| 165|Drosophila melanogaster RE61190p
protein.
Length = 165
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 120 CFFIHNNCLMAG--GVLLCLIFVIVLYPNKA------FSHIGSLIRSGVTTMSVFF-MLM 170
C N +++G ++L +I ++V++ + F I + I + +++ +L+
Sbjct: 12 CQSTRNGSVISGILAIVLSIITIVVIFTTRVHFKTIIFDFIPNDIVKIILVINLCMTILI 71
Query: 171 GVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFE-CVLYDDRCIFGEMDWLSSS 229
++++ G L + ++ WV+ L I+ A L+I++ + V + D + + WL
Sbjct: 72 SLLMIIGALKRNHYLM--VPWVV-LGIMIAIGLLISVIYTGIVFFIDGYVLTGVLWLIFG 128
Query: 230 ALLVLIITYLFRIYFISVANGYVMNE 255
++ I+TY + + + AN NE
Sbjct: 129 LIVCAIMTYCWCVVYSEYANLSEENE 154
>AE014297-2193|AAF55304.1| 165|Drosophila melanogaster CG10311-PA
protein.
Length = 165
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 120 CFFIHNNCLMAG--GVLLCLIFVIVLYPNKA------FSHIGSLIRSGVTTMSVFF-MLM 170
C N +++G ++L +I ++V++ + F I + I + +++ +L+
Sbjct: 12 CQSTRNGSVISGILAIVLSIITIVVIFTTRVHFKTIIFDFIPNDIVKIILVINLCMTILI 71
Query: 171 GVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFE-CVLYDDRCIFGEMDWLSSS 229
++++ G L + ++ WV+ L I+ A L+I++ + V + D + + WL
Sbjct: 72 SLLMIIGALKRNHYLM--VPWVV-LGIMIAIGLLISVIYTGIVFFIDGYVLTGVLWLIFG 128
Query: 230 ALLVLIITYLFRIYFISVANGYVMNE 255
++ I+TY + + + AN NE
Sbjct: 129 LIVCAIMTYCWCVVYSEYANLSEENE 154
>AY071700-1|AAL49322.1| 150|Drosophila melanogaster RH17222p
protein.
Length = 150
Score = 29.9 bits (64), Expect = 3.6
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 168 MLMGVVLLFGTLTNSEGMVQVFVWVLFLNI-VFAF-FLVIAICFECVLYDDRCIFGEMDW 225
++ + LL GTL E + VFVW++F I +F F V + F Y + +
Sbjct: 51 VVANICLLIGTL--KEKPILVFVWLIFAAIEAISFPFAVFGVIFHYGGYREATGMNNV-- 106
Query: 226 LSSSALLVLIITYLFRIYFISVANGYVM 253
ALLV IIT+L ++ + + +
Sbjct: 107 --FGALLVYIITFLLILFSARIVYSFYL 132
>AE013599-2782|AAF57627.1| 150|Drosophila melanogaster CG15083-PA
protein.
Length = 150
Score = 29.9 bits (64), Expect = 3.6
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 168 MLMGVVLLFGTLTNSEGMVQVFVWVLFLNI-VFAF-FLVIAICFECVLYDDRCIFGEMDW 225
++ + LL GTL E + VFVW++F I +F F V + F Y + +
Sbjct: 51 VVANICLLIGTL--KEKPILVFVWLIFAAIEAISFPFAVFGVIFHYGGYREATGMNNV-- 106
Query: 226 LSSSALLVLIITYLFRIYFISVANGYVM 253
ALLV IIT+L ++ + + +
Sbjct: 107 --FGALLVYIITFLLILFSARIVYSFYL 132
>U78084-1|AAB53369.1| 527|Drosophila melanogaster presenilin
protein.
Length = 527
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>U77934-1|AAB61139.1| 541|Drosophila melanogaster presenilin
homolog protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>AY061316-1|AAL28864.1| 541|Drosophila melanogaster LD23505p
protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>AY061243-1|AAL28791.1| 249|Drosophila melanogaster LD18367p
protein.
Length = 249
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 160 VTTMSVFFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFF 202
V T ++FF+ +GV LLF LT V ++ LF F+F+
Sbjct: 48 VITWAIFFIFLGVPLLFCALT-----VPACIFCLFTGTYFSFY 85
>AF093402-2|AAD52708.1| 527|Drosophila melanogaster presenilin a1
protein.
Length = 527
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>AF093402-1|AAD52707.1| 541|Drosophila melanogaster presenilin a2
protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>AF084184-2|AAC33128.1| 527|Drosophila melanogaster presenilin
short form protein.
Length = 527
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>AF084184-1|AAC33129.1| 541|Drosophila melanogaster presenilin long
form protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>AF017024-1|AAD01610.1| 541|Drosophila melanogaster presenilin
protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>AE014297-1008|AAO41529.1| 249|Drosophila melanogaster CG32939-PA
protein.
Length = 249
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 160 VTTMSVFFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFF 202
V T ++FF+ +GV LLF LT V ++ LF F+F+
Sbjct: 48 VITWAIFFIFLGVPLLFCALT-----VPACIFCLFTGTYFSFY 85
>AE014297-1002|AAG22138.1| 249|Drosophila melanogaster CG18542-PA
protein.
Length = 249
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 160 VTTMSVFFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFF 202
V T ++FF+ +GV LLF LT V ++ LF F+F+
Sbjct: 48 VITWAIFFIFLGVPLLFCALT-----VPACIFCLFTGTYFSFY 85
>AE014296-3364|AAN12132.1| 527|Drosophila melanogaster CG18803-PB,
isoform B protein.
Length = 527
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>AE014296-3363|AAF51598.1| 541|Drosophila melanogaster CG18803-PA,
isoform A protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 166 FFMLMGVVLLFGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFEC-VLYDDRCIFGEMD 224
F+ V LL+ V W N + +V+ + F VLY RC
Sbjct: 127 FYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHG 186
Query: 225 WLSSSA-LLVLIITYLF 240
WL S+ +L+ I TYL+
Sbjct: 187 WLILSSFMLLFIFTYLY 203
>BT022543-1|AAY54959.1| 268|Drosophila melanogaster IP07869p
protein.
Length = 268
Score = 28.7 bits (61), Expect = 8.3
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 121 FFIHNNCLMAGGVLLCLIFVIVLYPNKAF--SHIGSLIRSGVTTMSVFFMLM---GVVLL 175
+F+ N+ L G +LL + I L + S L+ G +S +++ G+ L
Sbjct: 105 YFLFNDSLDVGSLLLLMAAKINLRDQMDWFQSKYHILLLGGRLCLSSLYIIWIDEGLETL 164
Query: 176 FGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFECVLYDD-RCIFGEMDWLSSSALLVL 234
F + S G++ VF+W+ F +FA+ VIA+ + V + ++G D L S L
Sbjct: 165 FSIV--SFGLL-VFIWLGFHCKLFAYLTVIALLYHDVFSNHWSMLWGWNDTLLSIQYFSL 221
Query: 235 IITYLFRIYFISVANG 250
+ + +S G
Sbjct: 222 LFCKIGGFLMLSELGG 237
>AE014134-1986|AAF53030.1| 251|Drosophila melanogaster CG14070-PA
protein.
Length = 251
Score = 28.7 bits (61), Expect = 8.3
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 121 FFIHNNCLMAGGVLLCLIFVIVLYPNKAF--SHIGSLIRSGVTTMSVFFMLM---GVVLL 175
+F+ N+ L G +LL + I L + S L+ G +S +++ G+ L
Sbjct: 88 YFLFNDSLDVGSLLLLMAAKINLRDQMDWFQSKYHILLLGGRLCLSSLYIIWIDEGLETL 147
Query: 176 FGTLTNSEGMVQVFVWVLFLNIVFAFFLVIAICFECVLYDD-RCIFGEMDWLSSSALLVL 234
F + S G++ VF+W+ F +FA+ VIA+ + V + ++G D L S L
Sbjct: 148 FSIV--SFGLL-VFIWLGFHCKLFAYLTVIALLYHDVFSNHWSMLWGWNDTLLSIQYFSL 204
Query: 235 IITYLFRIYFISVANG 250
+ + +S G
Sbjct: 205 LFCKIGGFLMLSELGG 220
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.335 0.145 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,452,121
Number of Sequences: 52641
Number of extensions: 307248
Number of successful extensions: 1077
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1075
Number of HSP's gapped (non-prelim): 23
length of query: 256
length of database: 24,830,863
effective HSP length: 83
effective length of query: 173
effective length of database: 20,461,660
effective search space: 3539867180
effective search space used: 3539867180
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.7 bits)
S2: 61 (28.7 bits)
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