GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002331-TA|BGIBMGA002331-PA|IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site
         (221 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052015-1|AAK93439.1|  230|Drosophila melanogaster LD47387p pro...   119   4e-27
AE014297-63|ABI31122.1|  230|Drosophila melanogaster CG1103-PB, ...   119   4e-27
AE014297-62|AAF52142.2|  230|Drosophila melanogaster CG1103-PA, ...   119   4e-27
AY060607-1|AAL28155.1|  858|Drosophila melanogaster GH02677p pro...    29   5.1  
AE014297-1322|AAF54657.2|  897|Drosophila melanogaster CG6790-PA...    29   5.1  
AY226544-1|AAO47370.1|  460|Drosophila melanogaster pickpocket 1...    28   8.9  
AE014134-3333|AAX52675.1|  460|Drosophila melanogaster CG33508-P...    28   8.9  

>AY052015-1|AAK93439.1|  230|Drosophila melanogaster LD47387p
           protein.
          Length = 230

 Score =  119 bits (286), Expect = 4e-27
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 8/228 (3%)

Query: 1   MKLNLFKRSMIFATFFGSCLCIALIVGSLGTTHWVDARARKTSFPLKTDGRINFGLFEGH 60
           +K++L  R+++F+TFFGSCL I L++ S+ T HWV A  R+ +      G  NFGLF G+
Sbjct: 4   IKMSLHTRALVFSTFFGSCLAIGLLLVSMTTNHWVRATPRRKNSS-DAKGEFNFGLFFGN 62

Query: 61  RELNVTYGRRNYDISV----KAGNHPARRWAWXXXXXXXXXXXXXXXXXXVLAAL--GSA 114
             LN  +G R   + V    +  N     W W                  + A L   SA
Sbjct: 63  YHLNPGFGVRTNSVDVYTFVRTENDDTSFWLWLLTTLGTGFALLACAVAAIAAVLKSASA 122

Query: 115 ARTRCSPKPLLVGNTLAVVFTLGAIAVWLTEYFLRLQHNVMSDADLAQTWSSEGMADLGI 174
           A+   +   LL  N  A    + A   WL +++    HNV+      Q W S G+A LG 
Sbjct: 123 AKKGGTMMLLLTSNICAAGAQIVAFVAWLVQFYQYFIHNVLLTEQQQQHWYSNGLAYLGY 182

Query: 175 SFWLVVAAAIAAFVNDVCILIATADG-RDADTIAPALEEKVNGAIMLY 221
           SF+LVV + +   +N   +L A   G R+   +    ++K   AIMLY
Sbjct: 183 SFYLVVVSTVVVLLNIAILLYAQRLGLRNRQCLEAPCDDKNKTAIMLY 230


>AE014297-63|ABI31122.1|  230|Drosophila melanogaster CG1103-PB,
           isoform B protein.
          Length = 230

 Score =  119 bits (286), Expect = 4e-27
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 8/228 (3%)

Query: 1   MKLNLFKRSMIFATFFGSCLCIALIVGSLGTTHWVDARARKTSFPLKTDGRINFGLFEGH 60
           +K++L  R+++F+TFFGSCL I L++ S+ T HWV A  R+ +      G  NFGLF G+
Sbjct: 4   IKMSLHTRALVFSTFFGSCLAIGLLLVSMTTNHWVRATPRRKNSS-DAKGEFNFGLFFGN 62

Query: 61  RELNVTYGRRNYDISV----KAGNHPARRWAWXXXXXXXXXXXXXXXXXXVLAAL--GSA 114
             LN  +G R   + V    +  N     W W                  + A L   SA
Sbjct: 63  YHLNPGFGVRTNSVDVYTFVRTENDDTSFWLWLLTTLGTGFALLACAVAAIAAVLKSASA 122

Query: 115 ARTRCSPKPLLVGNTLAVVFTLGAIAVWLTEYFLRLQHNVMSDADLAQTWSSEGMADLGI 174
           A+   +   LL  N  A    + A   WL +++    HNV+      Q W S G+A LG 
Sbjct: 123 AKKGGTMMLLLTSNICAAGAQIVAFVAWLVQFYQYFIHNVLLTEQQQQHWYSNGLAYLGY 182

Query: 175 SFWLVVAAAIAAFVNDVCILIATADG-RDADTIAPALEEKVNGAIMLY 221
           SF+LVV + +   +N   +L A   G R+   +    ++K   AIMLY
Sbjct: 183 SFYLVVVSTVVVLLNIAILLYAQRLGLRNRQCLEAPCDDKNKTAIMLY 230


>AE014297-62|AAF52142.2|  230|Drosophila melanogaster CG1103-PA,
           isoform A protein.
          Length = 230

 Score =  119 bits (286), Expect = 4e-27
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 8/228 (3%)

Query: 1   MKLNLFKRSMIFATFFGSCLCIALIVGSLGTTHWVDARARKTSFPLKTDGRINFGLFEGH 60
           +K++L  R+++F+TFFGSCL I L++ S+ T HWV A  R+ +      G  NFGLF G+
Sbjct: 4   IKMSLHTRALVFSTFFGSCLAIGLLLVSMTTNHWVRATPRRKNSS-DAKGEFNFGLFFGN 62

Query: 61  RELNVTYGRRNYDISV----KAGNHPARRWAWXXXXXXXXXXXXXXXXXXVLAAL--GSA 114
             LN  +G R   + V    +  N     W W                  + A L   SA
Sbjct: 63  YHLNPGFGVRTNSVDVYTFVRTENDDTSFWLWLLTTLGTGFALLACAVAAIAAVLKSASA 122

Query: 115 ARTRCSPKPLLVGNTLAVVFTLGAIAVWLTEYFLRLQHNVMSDADLAQTWSSEGMADLGI 174
           A+   +   LL  N  A    + A   WL +++    HNV+      Q W S G+A LG 
Sbjct: 123 AKKGGTMMLLLTSNICAAGAQIVAFVAWLVQFYQYFIHNVLLTEQQQQHWYSNGLAYLGY 182

Query: 175 SFWLVVAAAIAAFVNDVCILIATADG-RDADTIAPALEEKVNGAIMLY 221
           SF+LVV + +   +N   +L A   G R+   +    ++K   AIMLY
Sbjct: 183 SFYLVVVSTVVVLLNIAILLYAQRLGLRNRQCLEAPCDDKNKTAIMLY 230


>AY060607-1|AAL28155.1|  858|Drosophila melanogaster GH02677p
           protein.
          Length = 858

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 132 VVFTLGAIAVWLTEYFLRLQHNVMSDADLAQ---TWSSEGMADLGISFWLVVAAAIAAFV 188
           VV T+ A+  W     ++L  NVM+   + +   TW +  +A LG+    +V    A F+
Sbjct: 391 VVTTVLALLGWQFYQLVKLSQNVMAPHYMRRGYLTWCTIFLASLGLLLGEMVFLQWAPFM 450

Query: 189 NDVCILI 195
             +C+++
Sbjct: 451 TVICLVV 457


>AE014297-1322|AAF54657.2|  897|Drosophila melanogaster CG6790-PA
           protein.
          Length = 897

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 132 VVFTLGAIAVWLTEYFLRLQHNVMSDADLAQ---TWSSEGMADLGISFWLVVAAAIAAFV 188
           VV T+ A+  W     ++L  NVM+   + +   TW +  +A LG+    +V    A F+
Sbjct: 430 VVTTVLALLGWQFYQLVKLSQNVMAPHYMRRGYLTWCTIFLASLGLLLGEMVFLQWAPFM 489

Query: 189 NDVCILI 195
             +C+++
Sbjct: 490 TVICLVV 496


>AY226544-1|AAO47370.1|  460|Drosophila melanogaster pickpocket 13
           protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 177 WLVVAAAIAAFVNDVCILIATADGRDADTIAPAL 210
           WL++ A+++AF N+    +  +  RD +T  PA+
Sbjct: 47  WLLIKASLSAFENNAISFVVESSFRDWNTNFPAI 80


>AE014134-3333|AAX52675.1|  460|Drosophila melanogaster CG33508-PA
           protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 177 WLVVAAAIAAFVNDVCILIATADGRDADTIAPAL 210
           WL++ A+++AF N+    +  +  RD +T  PA+
Sbjct: 47  WLLIKASLSAFENNAISFVVESSFRDWNTNFPAI 80


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.137    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,945,866
Number of Sequences: 52641
Number of extensions: 297216
Number of successful extensions: 732
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 721
Number of HSP's gapped (non-prelim): 7
length of query: 221
length of database: 24,830,863
effective HSP length: 82
effective length of query: 139
effective length of database: 20,514,301
effective search space: 2851487839
effective search space used: 2851487839
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 60 (28.3 bits)