Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002330-TA|BGIBMGA002330-PA|IPR011078|Protein of unknown
function UPF0001
(229 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533532-1|CAG38563.1| 275|Homo sapiens PROSC protein. 280 3e-75
BC012334-1|AAH12334.1| 275|Homo sapiens proline synthetase co-t... 280 3e-75
AB018566-1|BAA36842.1| 275|Homo sapiens Proline synthetase asso... 280 3e-75
BC127772-1|AAI27773.1| 863|Homo sapiens KIF5C protein protein. 33 0.63
BC110287-1|AAI10288.1| 725|Homo sapiens KIF5C protein protein. 33 0.63
AC108512-1|AAX82030.1| 684|Homo sapiens unknown protein. 33 0.63
AB209191-1|BAD92428.1| 265|Homo sapiens Kinesin heavy chain iso... 33 0.63
AB011103-1|BAA25457.2| 999|Homo sapiens KIAA0531 protein protein. 33 0.63
M14642-1|AAA51745.1| 396|Homo sapiens APOA4 protein. 33 1.1
M13654-1|AAA51744.1| 396|Homo sapiens APOA4 protein. 33 1.1
BC067299-1|AAH67299.1| 490|Homo sapiens Mdm4, transformed 3T3 c... 32 1.9
AY207458-1|AAO13494.1| 490|Homo sapiens Mdm4, transformed 3T3 c... 32 1.9
AL512306-5|CAI14100.1| 490|Homo sapiens Mdm4, transformed 3T3 c... 32 1.9
AL512306-3|CAI14098.1| 213|Homo sapiens Mdm4, transformed 3T3 c... 32 1.9
AK223228-1|BAD96948.1| 490|Homo sapiens mouse double minute 4 h... 32 1.9
AF007111-1|AAB62928.1| 490|Homo sapiens MDM2-like p53-binding p... 32 1.9
BC050529-1|AAH50529.1| 1050|Homo sapiens ankyrin repeat domain 2... 31 2.5
AL590543-3|CAI10943.1| 722|Homo sapiens chromosome 6 open readi... 31 2.5
AL359494-1|CAH71980.1| 722|Homo sapiens chromosome 6 open readi... 31 2.5
AK054561-1|BAB70755.1| 1060|Homo sapiens FLJ00040 protein protein. 31 2.5
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c... 31 4.5
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch... 31 4.5
AL121586-4|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 30 5.9
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 30 5.9
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 30 5.9
>CR533532-1|CAG38563.1| 275|Homo sapiens PROSC protein.
Length = 275
Score = 280 bits (687), Expect = 3e-75
Identities = 129/218 (59%), Positives = 164/218 (75%), Gaps = 1/218 (0%)
Query: 4 LKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDK 63
L+ V +++ AVARR +DLP I PRLVAVSK KP ++++EAY GQR FGENYV EL +K
Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEK 76
Query: 64 ASDPLILEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKE 123
AS+P IL C +IKWHFIGHLQ +NKL+ P LFM+ETVDS KLAD +N W + +
Sbjct: 77 ASNPKILSLCPEIKWHFIGHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGS 135
Query: 124 KERLRVMVQVNTSGEQAKSGLEPLETTKAVEHILENCPNLDFQGLMTIGQYDYDITKGPN 183
ERL+VMVQ+NTSGE++K GL P ET VEHI CPNL+F GLMTIG + +D+++GPN
Sbjct: 136 PERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPN 195
Query: 184 PDYLCLIKCRQEVCEKLNLDIKDVELSMGMSSDFAHAV 221
PD+ L+ R+E+C+KLN+ VELSMGMS+DF HAV
Sbjct: 196 PDFQLLLSLREELCKKLNIPADQVELSMGMSADFQHAV 233
>BC012334-1|AAH12334.1| 275|Homo sapiens proline synthetase
co-transcribed homolog (bacterial) protein.
Length = 275
Score = 280 bits (687), Expect = 3e-75
Identities = 129/218 (59%), Positives = 164/218 (75%), Gaps = 1/218 (0%)
Query: 4 LKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDK 63
L+ V +++ AVARR +DLP I PRLVAVSK KP ++++EAY GQR FGENYV EL +K
Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEK 76
Query: 64 ASDPLILEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKE 123
AS+P IL C +IKWHFIGHLQ +NKL+ P LFM+ETVDS KLAD +N W + +
Sbjct: 77 ASNPKILSLCPEIKWHFIGHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGS 135
Query: 124 KERLRVMVQVNTSGEQAKSGLEPLETTKAVEHILENCPNLDFQGLMTIGQYDYDITKGPN 183
ERL+VMVQ+NTSGE++K GL P ET VEHI CPNL+F GLMTIG + +D+++GPN
Sbjct: 136 PERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPN 195
Query: 184 PDYLCLIKCRQEVCEKLNLDIKDVELSMGMSSDFAHAV 221
PD+ L+ R+E+C+KLN+ VELSMGMS+DF HAV
Sbjct: 196 PDFQLLLSLREELCKKLNIPADQVELSMGMSADFQHAV 233
>AB018566-1|BAA36842.1| 275|Homo sapiens Proline synthetase
associated protein.
Length = 275
Score = 280 bits (687), Expect = 3e-75
Identities = 129/218 (59%), Positives = 164/218 (75%), Gaps = 1/218 (0%)
Query: 4 LKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDK 63
L+ V +++ AVARR +DLP I PRLVAVSK KP ++++EAY GQR FGENYV EL +K
Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEK 76
Query: 64 ASDPLILEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKE 123
AS+P IL C +IKWHFIGHLQ +NKL+ P LFM+ETVDS KLAD +N W + +
Sbjct: 77 ASNPKILSLCPEIKWHFIGHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGS 135
Query: 124 KERLRVMVQVNTSGEQAKSGLEPLETTKAVEHILENCPNLDFQGLMTIGQYDYDITKGPN 183
ERL+VMVQ+NTSGE++K GL P ET VEHI CPNL+F GLMTIG + +D+++GPN
Sbjct: 136 PERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPN 195
Query: 184 PDYLCLIKCRQEVCEKLNLDIKDVELSMGMSSDFAHAV 221
PD+ L+ R+E+C+KLN+ VELSMGMS+DF HAV
Sbjct: 196 PDFQLLLSLREELCKKLNIPADQVELSMGMSADFQHAV 233
>BC127772-1|AAI27773.1| 863|Homo sapiens KIF5C protein protein.
Length = 863
Score = 33.5 bits (73), Expect = 0.63
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 104 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 162
++ EKL+ + NK ++ ++ + +L ++ +N EQA+ L+ LE T + E L N
Sbjct: 650 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 709
Query: 163 LDFQGLMT 170
L Q L T
Sbjct: 710 LFVQDLTT 717
>BC110287-1|AAI10288.1| 725|Homo sapiens KIF5C protein protein.
Length = 725
Score = 33.5 bits (73), Expect = 0.63
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 104 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 162
++ EKL+ + NK ++ ++ + +L ++ +N EQA+ L+ LE T + E L N
Sbjct: 512 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 571
Query: 163 LDFQGLMT 170
L Q L T
Sbjct: 572 LFVQDLTT 579
>AC108512-1|AAX82030.1| 684|Homo sapiens unknown protein.
Length = 684
Score = 33.5 bits (73), Expect = 0.63
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 104 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 162
++ EKL+ + NK ++ ++ + +L ++ +N EQA+ L+ LE T + E L N
Sbjct: 471 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 530
Query: 163 LDFQGLMT 170
L Q L T
Sbjct: 531 LFVQDLTT 538
>AB209191-1|BAD92428.1| 265|Homo sapiens Kinesin heavy chain
isoform 5C variant protein.
Length = 265
Score = 33.5 bits (73), Expect = 0.63
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 104 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 162
++ EKL+ + NK ++ ++ + +L ++ +N EQA+ L+ LE T + E L N
Sbjct: 52 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 111
Query: 163 LDFQGLMT 170
L Q L T
Sbjct: 112 LFVQDLTT 119
>AB011103-1|BAA25457.2| 999|Homo sapiens KIAA0531 protein protein.
Length = 999
Score = 33.5 bits (73), Expect = 0.63
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 104 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 162
++ EKL+ + NK ++ ++ + +L ++ +N EQA+ L+ LE T + E L N
Sbjct: 786 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 845
Query: 163 LDFQGLMT 170
L Q L T
Sbjct: 846 LFVQDLTT 853
>M14642-1|AAA51745.1| 396|Homo sapiens APOA4 protein.
Length = 396
Score = 32.7 bits (71), Expect = 1.1
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 106 SEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVEHIL-ENCPNL 163
S+K+ DNL + L+ R E ++ QVNT EQ + L+PL + +E +L EN +L
Sbjct: 121 SQKIGDNLRE--LQQRLEPYADQLRTQVNTQAEQLRRQLDPL--AQRMERVLRENADSL 175
>M13654-1|AAA51744.1| 396|Homo sapiens APOA4 protein.
Length = 396
Score = 32.7 bits (71), Expect = 1.1
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 106 SEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVEHIL-ENCPNL 163
S+K+ DNL + L+ R E ++ QVNT EQ + L+PL + +E +L EN +L
Sbjct: 121 SQKIGDNLRE--LQQRLEPYADQLRTQVNTQAEQLRRQLDPL--AQRMERVLRENADSL 175
>BC067299-1|AAH67299.1| 490|Homo sapiens Mdm4, transformed 3T3 cell
double minute 4, p53 binding protein (mouse) protein.
Length = 490
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 76 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 135
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 136 SG-EQAKSGLEPLETTKAVE 154
+ EQ + + K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277
>AY207458-1|AAO13494.1| 490|Homo sapiens Mdm4, transformed 3T3 cell
double minute 4, p53 binding protein (mouse) protein.
Length = 490
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 76 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 135
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 136 SG-EQAKSGLEPLETTKAVE 154
+ EQ + + K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277
>AL512306-5|CAI14100.1| 490|Homo sapiens Mdm4, transformed 3T3 cell
double minute 4, p53 binding protein (mouse) protein.
Length = 490
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 76 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 135
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 136 SG-EQAKSGLEPLETTKAVE 154
+ EQ + + K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277
>AL512306-3|CAI14098.1| 213|Homo sapiens Mdm4, transformed 3T3 cell
double minute 4, p53 binding protein (mouse) protein.
Length = 213
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 76 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 135
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 83 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 142
Query: 136 SG-EQAKSGLEPLETTKAVE 154
+ EQ + + K +E
Sbjct: 143 ADTEQTSEEVGKVSDKKVIE 162
>AK223228-1|BAD96948.1| 490|Homo sapiens mouse double minute 4
homolog protein.
Length = 490
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 76 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 135
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 136 SG-EQAKSGLEPLETTKAVE 154
+ EQ + + K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277
>AF007111-1|AAB62928.1| 490|Homo sapiens MDM2-like p53-binding
protein protein.
Length = 490
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 76 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 135
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 136 SG-EQAKSGLEPLETTKAVE 154
+ EQ + + K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277
>BC050529-1|AAH50529.1| 1050|Homo sapiens ankyrin repeat domain 27
(VPS9 domain) protein.
Length = 1050
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 174 YDYDITKGPNPDYLCLIKCRQEVCEKL 200
YD D+ K NP YL L KCR ++C K+
Sbjct: 4 YDEDLLK--NPFYLALQKCRPDLCSKV 28
>AL590543-3|CAI10943.1| 722|Homo sapiens chromosome 6 open reading
frame 97 protein.
Length = 722
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 70 LEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNK-----QWLKYRKEK 124
L C+D+ L N+L S L ++T++ K ++LNK + +K + EK
Sbjct: 549 LNTCRDLHTELKAKLADT--NELKASAWLHFIKTLEQTKAIEDLNKSRDQLEKMKEKAEK 606
Query: 125 ERLRVMVQVNTSGEQAKSGLE 145
+ + V +++T+ +AK E
Sbjct: 607 KLMSVKSELDTTEHEAKENKE 627
>AL359494-1|CAH71980.1| 722|Homo sapiens chromosome 6 open reading
frame 97 protein.
Length = 722
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 70 LEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNK-----QWLKYRKEK 124
L C+D+ L N+L S L ++T++ K ++LNK + +K + EK
Sbjct: 549 LNTCRDLHTELKAKLADT--NELKASAWLHFIKTLEQTKAIEDLNKSRDQLEKMKEKAEK 606
Query: 125 ERLRVMVQVNTSGEQAKSGLE 145
+ + V +++T+ +AK E
Sbjct: 607 KLMSVKSELDTTEHEAKENKE 627
>AK054561-1|BAB70755.1| 1060|Homo sapiens FLJ00040 protein protein.
Length = 1060
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 174 YDYDITKGPNPDYLCLIKCRQEVCEKL 200
YD D+ K NP YL L KCR ++C K+
Sbjct: 14 YDEDLLK--NPFYLALQKCRPDLCSKV 38
>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy chain
9 protein.
Length = 4486
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 184 PDYLCLIKCRQEVCEKLNLDIKDVELSMGMSSDFAHAVSFCTWVNL 229
PDY L +CR+EVC+ +K++ ++GM + HA W N+
Sbjct: 1287 PDYKQLRQCRKEVCQ-----LKELWDTIGMVTSSIHAWETTPWRNI 1327
>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain 9
protein.
Length = 4486
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 184 PDYLCLIKCRQEVCEKLNLDIKDVELSMGMSSDFAHAVSFCTWVNL 229
PDY L +CR+EVC+ +K++ ++GM + HA W N+
Sbjct: 1287 PDYKQLRQCRKEVCQ-----LKELWDTIGMVTSSIHAWETTPWRNI 1327
>AL121586-4|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 77 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 133
+W G ++ KL G +TVD + D+L+K+ +K +E LR ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal
Nek2-associated protein 1 protein.
Length = 2442
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 77 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 133
+W G ++ KL G +TVD + D+L+K+ +K +E LR ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome
associated protein protein.
Length = 2442
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 77 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 133
+W G ++ KL G +TVD + D+L+K+ +K +E LR ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,077,286
Number of Sequences: 224733
Number of extensions: 1322140
Number of successful extensions: 2611
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2589
Number of HSP's gapped (non-prelim): 27
length of query: 229
length of database: 73,234,838
effective HSP length: 87
effective length of query: 142
effective length of database: 53,683,067
effective search space: 7622995514
effective search space used: 7622995514
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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