GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002330-TA|BGIBMGA002330-PA|IPR011078|Protein of unknown
function UPF0001
         (229 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   5.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.5  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 14  AVARRSKDLPQIAPRLV--AVSKIKPVELIVEAYNAGQRHFGENYVNELSDKASDPLILE 71
           A+   + DL  ++   V  A  +   V +I E+Y +G  +F E     +  K+S    LE
Sbjct: 429 AIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSKSSSINKLE 488

Query: 72  KCKDIK 77
             ++ K
Sbjct: 489 DLRNKK 494


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 14  AVARRSKDLPQIAPRLV--AVSKIKPVELIVEAYNAGQRHFGENYVNELSDKASDPLILE 71
           A+   + DL  ++   V  A  +   V +I E+Y +G  +F E     +  K+S    LE
Sbjct: 429 AIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSKSSSINKLE 488

Query: 72  KCKDIK 77
             ++ K
Sbjct: 489 DLRNKK 494


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 14  AVARRSKDLPQIAPRLV--AVSKIKPVELIVEAYNAGQRHFGENYVNELSDKASDPLILE 71
           A+   + DL  ++   V  A  +   V +I E+Y +G  +F E     +  K+S    LE
Sbjct: 429 AIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSKSSSINKLE 488

Query: 72  KCKDIK 77
             ++ K
Sbjct: 489 DLRNKK 494


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 25   IAPRLVAVSKIKPVELIVEAYNAGQRHFG 53
            +  R  A  K++  E+I E Y  G R  G
Sbjct: 1537 VVSRNKAYQKVEENEIIFEIYKMGDRFIG 1565


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 131 VQVNTSGEQAKSGLEPLETTKAVEHILEN 159
           +QVN SG+     +E  E       +L+N
Sbjct: 182 IQVNVSGDNVPQPIESFEAAGLRNIVLDN 210


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 86  TNKINKLLGSPGLFMVETVDSEKLADNLN 114
           +NK+  +L  PG F  E    +++ D+ N
Sbjct: 122 SNKMTVILTPPGRFFCEVRPIKRVKDSTN 150


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/34 (23%), Positives = 19/34 (55%)

Query: 36  KPVELIVEAYNAGQRHFGENYVNELSDKASDPLI 69
           K ++L  E Y +G+R+  +N   +   K ++ ++
Sbjct: 257 KVIQLKKEEYKSGKRNIIDNSAQKTESKTNNIVV 290


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 60  LSDKASDPL--ILEKCKDIKWHFIGHLQTNKINKLLGSPGLF 99
           LS +A+D    +   CK   WHF+   Q   +   +G   +F
Sbjct: 277 LSSEATDLRMGVASFCKAFPWHFVVDRQLELVQLGVGFMRIF 318


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,564
Number of Sequences: 429
Number of extensions: 2658
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 9
length of query: 229
length of database: 140,377
effective HSP length: 56
effective length of query: 173
effective length of database: 116,353
effective search space: 20129069
effective search space used: 20129069
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)