GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002329-TA|BGIBMGA002329-PA|undefined
         (460 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   1.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   4.5  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 233 YCPLLSRIFETHANVESCHS 252
           YC L+S++   H  V +CH+
Sbjct: 92  YCQLMSKLLGNHQLVYNCHT 111


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 162 HGPCGALNPLSPCMADGKCTKRYPRPLVAET 192
           HG CG  NPL   +     +   P P ++ T
Sbjct: 377 HGLCGPKNPLINILYANMNSYSVPEPTISTT 407


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,292
Number of Sequences: 317
Number of extensions: 4825
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 460
length of database: 114,650
effective HSP length: 59
effective length of query: 401
effective length of database: 95,947
effective search space: 38474747
effective search space used: 38474747
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)