GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002328-TA|BGIBMGA002328-PA|IPR000875|Cecropin,
IPR004117|Olfactory receptor, Drosophila
         (375 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    31   0.010
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    26   0.51 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    26   0.51 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   4.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   8.3  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 31.5 bits (68), Expect = 0.010
 Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 19/174 (10%)

Query: 112 TEDRKALMAKLVI----VLTGISTVIITAFSCLALF-------EGEMTIDAWMPFDPMKS 160
           TE++K +  + VI    V+   + +II   +C+A+F         EM +  W PFD  K 
Sbjct: 104 TENQKKIFDESVIFERKVMKNFAILIIP--TCVAMFIVPYFQDRREMPLIVWFPFD-YKQ 160

Query: 161 KMNLFAASQILAATFVVPCGYRAFAMLGIVCSLILYLRDQLVDLQNKIRDL-RFATG--- 216
            + +F     + A   +   Y   +      + ++ +  Q   + + +R+L +  T    
Sbjct: 161 PV-VFDLVYFILAFACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFR 219

Query: 217 NVEKLRDDFKLIVKKHVRLLGYSKVIEMIFKEYFFIQNMAVTAELCLNAMMVSV 270
           NV + R  F   ++++  +L Y+K++   ++    +Q       LCL    +S+
Sbjct: 220 NVAESRKIFIECIEQYNVILRYTKIVSDTYQGILVVQFFCSLVALCLTMYKLSL 273



 Score = 31.1 bits (67), Expect = 0.013
 Identities = 14/67 (20%), Positives = 30/67 (44%)

Query: 307 SEGIAMAAYESSWILWPVDMQKDLLIVITAAQKPMKLSAGGMAVLSVQTYSQTLYNGYSI 366
           +E +  A YE  W      +Q ++ I +   +KP+      +  L + T+ + +   +S 
Sbjct: 274 TEDLYFAIYEMHWYDASKQIQNEVFIFMGQLEKPIVFYVANIFSLDLDTFKKIMQKAWSF 333

Query: 367 FAVLNDI 373
           F  L ++
Sbjct: 334 FTALKNM 340


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 18  YLFYVGLWPSNEAKRIEKIAYKIYEYQLHVLSLIFLVTTGIGTYKNHKDIIALLTNLD 75
           Y FY+    +  ++++  I +K  +        + ++T+ +  YK   D+  LL+NL+
Sbjct: 87  YFFYLSYIYTTYSRKLSGI-FKYIDQMAGYTGFLAMLTSMVMFYKRSNDLKTLLSNLE 143


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 18 YLFYVGLWPSNEAKRIEKIAYKIYEYQLHVLSLIFLVTTGIGTYKNHKDIIALLTNLD 75
          Y FY+    +  ++++  I +K  +        + ++T+ +  YK   D+  LL+NL+
Sbjct: 43 YFFYLSYIYTTYSRKLSGI-FKYIDQMAGYTGFLAMLTSMVMFYKRSNDLKTLLSNLE 99


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 203 DLQNKIRDLRFATGNVEKLRDDFKLI 228
           ++ NKIRD  +   N E   D+F LI
Sbjct: 348 NVANKIRDFYYEGPNSENNLDNFYLI 373


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 339 KPMKLSAGGMAVLSVQTYSQTLYNGYSI 366
           KP+ L++G +++L     S+T     S+
Sbjct: 491 KPIDLNSGDLSMLETNNLSETFTQNLSL 518


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.140    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,727
Number of Sequences: 317
Number of extensions: 3029
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 6
length of query: 375
length of database: 114,650
effective HSP length: 58
effective length of query: 317
effective length of database: 96,264
effective search space: 30515688
effective search space used: 30515688
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 44 (21.8 bits)