Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002326-TA|BGIBMGA002326-PA|IPR000276|Rhodopsin-like GPCR
superfamily
(382 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 33 0.051
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 33 0.089
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 29 1.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 1.4
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 28 1.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 4.4
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 27 5.8
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 5.8
SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr ... 26 7.7
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 7.7
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 26 7.7
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 26 7.7
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 33.5 bits (73), Expect = 0.051
Identities = 23/106 (21%), Positives = 40/106 (37%)
Query: 276 YLHPDRRPSDISPNYSTFTEVGPEETEFGEVVMSLGDICPSKEASPRKSVNVSCDTASSG 335
Y+ ++ D PN + G E +V + S R + + T++ G
Sbjct: 26 YIDEEQTWKDYDPNSLKMNKAGSTGAEVSDVTAEATEGKESSNGEDRHTKRLYESTSAEG 85
Query: 336 YCSGGSNKRSSSGQPPYGWRPSCSSAIATRDLAKAATELNAQELVR 381
Y SG NK+S S P + A+ + L T +E+ +
Sbjct: 86 YPSGSRNKKSKSENSEASPAPVINKAVYIQGLPLDVTVDEIEEVFK 131
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 32.7 bits (71), Expect = 0.089
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 243 AIRQREALTRTSSNILLNSVHIKHTSHAAHHSHYLHPDRRPSDISPNYSTFTEVGPEETE 302
+I ++L TSS ++S + +TS + S + S S ++S T P T
Sbjct: 655 SITGSQSLKETSSPAYVSST-VSYTSSSVDSSSTYNSTGSSSSDSQSFSGTTYSDPTTTI 713
Query: 303 FGEV--VMSLGDICPSKEASPRKS------------VNVSCDTASSGYCSGGSNKRSSSG 348
EV ++S S + P+ S ++ S D +SGY ++ ++S+
Sbjct: 714 TSEVSSILSSPTSMQSSVSRPQSSGDASGFNTIFTSISQSSDGETSGYTISSNSSQNSAS 773
Query: 349 QPPYGWRPSCSSAIATRDLAKAATELNAQ 377
+P + S SSA T + +T +++Q
Sbjct: 774 EPQTAFTSSSSSATPTITQSSISTSVSSQ 802
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 253 TSSNILLNSVHIKHTSHAAHHSHYLHPDRRPSDISPNYSTFTEVGPEETEF 303
T ++++L +H+K+T+ ++ H D + S++S N+S F E P+ +
Sbjct: 602 TMNDLILPPLHLKNTTQ----TNNAHEDAQSSNLSQNHSLFYERIPQRPSY 648
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 319 ASPRKSVNVSCDTASSGYCSGGSNKRSSSGQPPYGWRPSCSSAIATRDLAKAATELNAQE 378
+SP S + SC T++S +GGS+ S+ P + S++I + ++T+ N+
Sbjct: 105 SSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNP 164
Query: 379 L 379
L
Sbjct: 165 L 165
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 319 ASPRKSVNVSCDTASSGYCSGGSNKRSSSGQPPYGWRPSCSSAIATRDLAKAATELNAQE 378
++P + + SC T++S +GGS+ S+ P + S++I + ++T+ N+
Sbjct: 162 SNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSP 221
Query: 379 L 379
L
Sbjct: 222 L 222
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 28.3 bits (60), Expect = 1.9
Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 247 REALTRTSSNILLNSVHIKHTSHAAHHSHYLHPDRRPSDISPNYSTFTEVGPEETEFGEV 306
+E LT T +L +H+ + + A ++ P R P N +F++ EET
Sbjct: 483 QEELTNTLEPSVLKQLHLANPNRQAASFNFSGPKRAPIRPLSNLRSFSKSQKEETSSNSS 542
Query: 307 VMS-LGDICPSKEASPRKSVNVSCDTASSGYCSGGSNKRSSSGQPPYGWRPSCSSAIAT 364
S + + A+P V T S + S SG P PS S AT
Sbjct: 543 NSSGTRRLGLPQRATPASRERVLPYTRSQAFHSTSLPPSLPSGHSPSIAIPSKRSVSAT 601
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 4.4
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 262 VHIKHTSHAAHHSHYLHPDRRPSDISPNYSTFTEVGPEETEFGEVVMSLGDICPSKEASP 321
VH H H+ Y P P + P +T+ P + + I PS ++S
Sbjct: 194 VHPNRLPHPIHNHPYSSPTSYPPPLCP--ATYCPSNPPQ------LAPATAIAPSSQSSQ 245
Query: 322 RKSVNVSCDTAS 333
KSVN S +S
Sbjct: 246 HKSVNYSVTPSS 257
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 26.6 bits (56), Expect = 5.8
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 88 YYVVSLAVADMLVALCAMTFNASSE--LTDAWLFGPLACDIFNSLDVYFSSASILHLCCI 145
Y L V D L + +T + +E LT + + CD F VYFS+ + + CI
Sbjct: 780 YVFAKLIVKDSLGMMHFLTSSLLNEQGLTAFEVLMTVWCDNF----VYFSNFKNISIICI 835
Query: 146 SVDRYYAIVRPL 157
++ + Y+ PL
Sbjct: 836 AMTKIYSFDSPL 847
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 60 TIILGALFGNALVIISVHRHRKLRVLTN 87
T ++G FGN+ +I+V R+R + V+ N
Sbjct: 5 TNVVGIDFGNSKTVIAVARNRAIDVIVN 32
>SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 324
Score = 26.2 bits (55), Expect = 7.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 132 VYFSSASILHLCCISVDRYYAIVRPL 157
+ FS A ILH+ C++ R + ++ P+
Sbjct: 21 ILFSIAFILHVACLAFTRKWLVIVPI 46
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 26.2 bits (55), Expect = 7.7
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 209 IFKVNMVYAIVSSSVSFWIPSLV 231
I++ + A++ +S SFWIP ++
Sbjct: 488 IYRFYFISALIFTSYSFWIPQII 510
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 7.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 247 REALTRTSSNILLNSVHIKHTSHAAHHSHYLHPDRRPS----DI--SPNYSTFTEVGPEE 300
R+A+TR NS+ H H H + +L D RP D+ S + STF+ G +E
Sbjct: 776 RQAMTRLKGLRETNSILPVHQLHMFHDTSHLLMDYRPQGSILDLVNSMHNSTFSSSGMDE 835
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 26.2 bits (55), Expect = 7.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 6 LLSDGVFRSEVEARGRGTESAFL 28
L+S+GVF +VEA RG SA++
Sbjct: 989 LVSEGVFVEKVEANRRGFVSAYV 1011
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.324 0.134 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,680,448
Number of Sequences: 5004
Number of extensions: 68203
Number of successful extensions: 243
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 230
Number of HSP's gapped (non-prelim): 17
length of query: 382
length of database: 2,362,478
effective HSP length: 74
effective length of query: 308
effective length of database: 1,992,182
effective search space: 613592056
effective search space used: 613592056
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)
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