Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002324-TA|BGIBMGA002324-PA|IPR001734|Na+/solute
symporter
(581 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 121 1e-27
AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical ... 118 9e-27
Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical pr... 67 3e-11
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 31 2.2
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 31 2.2
U49829-6|AAA93387.1| 498|Caenorhabditis elegans Hypothetical pr... 30 3.9
AC024750-6|AAF60442.2| 341|Caenorhabditis elegans Seven tm rece... 30 5.2
AC024750-7|AAF60436.2| 341|Caenorhabditis elegans Seven tm rece... 29 6.8
Z83744-4|CAB06040.3| 712|Caenorhabditis elegans Hypothetical pr... 29 9.0
AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 29 9.0
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 121 bits (292), Expect = 1e-27
Identities = 77/295 (26%), Positives = 144/295 (48%), Gaps = 15/295 (5%)
Query: 42 YIFAGTGVSTLAMILSVARGTLGVRSFLGFPSEQVYRGSAMWETLFGMVLAFPIVCWIFV 101
Y+ G + L + LS+ L LG P+E RG+ +W V + + C++F+
Sbjct: 48 YLMGGRQLPPLPVALSLLTTFLSGILMLGVPAEMFQRGAQIWLNFVIGVASSIVTCFVFL 107
Query: 102 PVYYRLSTNSVYEYLEMRFGSIWVRRIAAATFLLRQVLNLAVTVYTPTVALHAVLALPHW 161
PV++++ + ++EY R+ SI +RR+ + FLL ++ ++V +Y P+VAL VL + W
Sbjct: 108 PVFHKMKSTCLHEYFIHRYNSILIRRLFSLLFLLFTIVYMSVVLYAPSVALSPVLQINKW 167
Query: 162 ASAAALTVVSIVFNLLGGLAAAIRADVIQTLTMILVSGAFIV----QATVKAGGPATVFN 217
+ ++ LGGL A + D +Q +I+ +G F + + + GG V +
Sbjct: 168 YLVLIFGCTTTLYTCLGGLKAVVWTDSLQ--AVIMYTGVFTLIYKGLSHPRVGGLERVLS 225
Query: 218 GNLEGGRL-KFFQFTWDPTVRVDTLSAIIGQLFMS----ISIYGCQQTFVQRYCSMSSES 272
+ GR+ + + W R+D +++ LF ++ +G Q +QRY S+ S
Sbjct: 226 IAWDSGRISELGRMDW----RIDQYNSLWINLFSGTIVWLASFGVNQLAIQRYASLPSLK 281
Query: 273 RVKKTLLANVPAVSVLFSLSWIVGMALYAVYKYCDPLATSKISAPDEILPFYVQD 327
+ ++ + +VL S+ VG A + C+PL T ++ D I + +D
Sbjct: 282 VAQSIIIYTLAPFTVLCSIVAFVGFIALAYFYNCNPLETGEVKESDHITISFARD 336
>AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical
protein F52H2.4 protein.
Length = 446
Score = 118 bits (285), Expect = 9e-27
Identities = 69/238 (28%), Positives = 124/238 (52%), Gaps = 11/238 (4%)
Query: 90 VLAFPIVCWIFVPVYYRLSTNSVYEYLEMRFGSIWVRRIAAATFLLRQVLNLAVTVYTPT 149
V++FPIV ++F+PV YRL ++YEY E RF R + + F ++ +L +V +Y P+
Sbjct: 10 VISFPIVAFVFLPVLYRLKLTTIYEYFERRF-DYKCRFVTTSLFCVQMILYNSVALYAPS 68
Query: 150 VALHAVLALPHWASAAALTVVSIVFNLLGGLAAAIRADVIQTLTMILVSGAFIVQATVKA 209
+A+ ++ +P S V+S + +GG+ A I IQ L +I ++ FI+ +++
Sbjct: 69 LAIASITNIPITVSILITAVLSAFYISVGGVKAGIHTSAIQML-LIFLTMTFIISISLRE 127
Query: 210 GGPATVFNGNLEGGRLKFFQFTWDPTVRVDTLSAIIGQLFMSISIYGCQQTFVQRYCSMS 269
V+ + G R + +PT+R S +IG ++++ Q +QRY +M
Sbjct: 128 MSIHDVYTSVVHGKRFRI-----NPTIRHSVWSLLIGGTGNILALFAANQLSIQRYMAMD 182
Query: 270 SESRVKKTLLANVPAVSVLFSLSWIVGMALYAVYKYCDPLATSKISAPDEILPFYVQD 327
+ +K +L N+ +++ VG +YA YK C P +I +E+LP +V D
Sbjct: 183 TLKSAQKVVLLNIVCNTIILVSYVSVGFLIYAHYKDCHP----QIGNANELLPRFVMD 236
>Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical
protein ZK822.5b protein.
Length = 431
Score = 67.3 bits (157), Expect = 3e-11
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 141 LAVTVYTPTVALHAVLALPHWASAAALTVVSIVFNLLGGLAAAIRADVIQTLTMILVSGA 200
++V +Y P+VAL VL + W + ++ LGGL A + D +Q + I+ +G
Sbjct: 1 MSVVLYAPSVALSPVLQINKWYLVLIFGCTTTLYTCLGGLKAVVWTDSLQAV--IMYTGV 58
Query: 201 FIV----QATVKAGGPATVFNGNLEGGRL-KFFQFTWDPTVRVDTLSAIIGQLFMS---- 251
F + + + GG V + + GR+ + + W R+D +++ LF
Sbjct: 59 FTLIYKGLSHPRVGGLERVLSIAWDSGRISELGRMDW----RIDQYNSLWINLFSGTIVW 114
Query: 252 ISIYGCQQTFVQRYCSMSSESRVKKTLLANVPAVSVLFSLSWIVGMALYAVYKYCDPLAT 311
++ +G Q +QRY S+ S + ++ + +VL S+ VG A + C+PL T
Sbjct: 115 LASFGVNQLAIQRYASLPSLKVAQSIIIYTLAPFTVLCSIVAFVGFIALAYFYNCNPLET 174
Query: 312 SKISAPDEILPFYVQD 327
++ D I + +D
Sbjct: 175 GEVKESDHITISFARD 190
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 528 IEKSNIEVKEDKESSEKTDQTVVDAKPTVFATTSSRLFEAYEVRRSPSPARTRL 581
+ N +++ +E E + VD K + AT+S AY++R++ R+ L
Sbjct: 131 VASENANIRKWQEQDEDINDLKVDVKSNLLATSSDGTLGAYDLRKAKLKMRSEL 184
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 528 IEKSNIEVKEDKESSEKTDQTVVDAKPTVFATTSSRLFEAYEVRRSPSPARTRL 581
+ N +++ +E E + VD K + AT+S AY++R++ R+ L
Sbjct: 131 VASENANIRKWQEQDEDINDLKVDVKSNLLATSSDGTLGAYDLRKAKLKMRSEL 184
>U49829-6|AAA93387.1| 498|Caenorhabditis elegans Hypothetical
protein F27D9.2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 61 GTLGVRSFLGFPSEQVYRGSAMWETLFGMVLAFPIVCWIFVPVYYRLSTNSVYEYLEMRF 120
G+ G E+ +A T+ G + AF +C+IF V R N V+ ++ +
Sbjct: 289 GSAYTMMMFGLEKEESVSINAGVHTVAGSIAAFMFICFIFTGV-RRYMKNRVFTFISLSI 347
Query: 121 GSIWV 125
+W+
Sbjct: 348 PLVWL 352
>AC024750-6|AAF60442.2| 341|Caenorhabditis elegans Seven tm
receptor protein 175 protein.
Length = 341
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 252 ISIYGCQQTFVQRYCSMSSESRVKKTLLANVPAVSVLFSLSWIVGMALYAVYKYC 306
++IYG FV RY ++ + RVK N + F++ + G A YAV + C
Sbjct: 105 VAIYGIAIHFVYRYFALERQGRVK---YFNKKYLVFWFTIPLLGGAAWYAVTELC 156
>AC024750-7|AAF60436.2| 341|Caenorhabditis elegans Seven tm
receptor protein 174 protein.
Length = 341
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 252 ISIYGCQQTFVQRYCSMSSESRVKKTLLANVPAVSVLFSLSWIVGMALYAVYKYC 306
++IYG FV RY ++ + RVK N + F++ + G A YAV + C
Sbjct: 105 VAIYGIAIHFVYRYFALERQGRVK---YFNKKYLVFWFTIPLLGGAAWYAVTECC 156
>Z83744-4|CAB06040.3| 712|Caenorhabditis elegans Hypothetical
protein C06A12.4 protein.
Length = 712
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 284 AVSVLFSLSWIVGMALYAVYKY-CDPLATSKISAPD 318
A + L ++W++ +ALY V + CD I+ PD
Sbjct: 309 AATCLIDINWVLKIALYGVTNFVCDNFDAENITMPD 344
>AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical
protein Y18D10A.17 protein.
Length = 340
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 528 IEKSNIEVKEDKESSEKTDQTVVDAKPTVFATTSSRLFEAYE 569
+EK NIE K + E EK D D K + F S E E
Sbjct: 207 LEKLNIEDKAEPEVEEKKDAAFYDKKTSFFDNISCESLEKAE 248
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.135 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,051,454
Number of Sequences: 27539
Number of extensions: 373798
Number of successful extensions: 1370
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1360
Number of HSP's gapped (non-prelim): 10
length of query: 581
length of database: 12,573,161
effective HSP length: 85
effective length of query: 496
effective length of database: 10,232,346
effective search space: 5075243616
effective search space used: 5075243616
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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