GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002323-TA|BGIBMGA002323-PA|undefined
         (59 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   0.97 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    19   3.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    19   3.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    19   3.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    19   5.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    18   6.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          18   6.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    18   9.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    18   9.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    18   9.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 0.97
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 1   MELDNDSNNNADPTPLPV--RHNYDTVLAPRG--SFLYNSIVHRR 41
           ME+ N    N DP PL V   H    +L  +G   F+  +I+ RR
Sbjct: 437 MEMWNIPRENIDPIPLVVVLTHLIPFMLIHQGETQFVVANIILRR 481


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 7   SNNNADPTPLPVRHNYDTVLAPRGSFLYNSIVHRRN 42
           ++NN    P+    +       RG   YN IV  +N
Sbjct: 276 ASNNKLGAPIVAGGDAGRYTGERGMMGYNEIVEAQN 311


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
          protein.
          Length = 287

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query: 32 FLYNSIVHRRNTNVEKAPT 50
          F+++ +VH   T +  +PT
Sbjct: 72 FVHSGMVHNDGTQLMPSPT 90


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
          protein.
          Length = 249

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query: 32 FLYNSIVHRRNTNVEKAPT 50
          F+++ +VH   T +  +PT
Sbjct: 72 FVHSGMVHNDGTQLMPSPT 90


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 49  PTPPPKKR 56
           P+PPP++R
Sbjct: 101 PSPPPEER 108


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 18.2 bits (35), Expect = 6.8
 Identities = 7/16 (43%), Positives = 8/16 (50%)

Query: 3   LDNDSNNNADPTPLPV 18
           L   SN   +P P PV
Sbjct: 382 LGGSSNEIVEPVPQPV 397


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 18.2 bits (35), Expect = 6.8
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 20  HNYDTVLAPRGSFLYNSIVHRRNTN 44
           H    + AP G   +  +VH++ +N
Sbjct: 287 HALSGLKAPPGVEHFEDVVHKKCSN 311



 Score = 18.2 bits (35), Expect = 6.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)

Query: 9   NNADPTPLPVR 19
           NNA P P P R
Sbjct: 728 NNAPPPPPPPR 738



 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 48  APTPPPKKR 56
           AP PPP  R
Sbjct: 730 APPPPPPPR 738


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 5/13 (38%), Positives = 8/13 (61%)

Query: 42  NTNVEKAPTPPPK 54
           N+     P+PPP+
Sbjct: 222 NSKKSATPSPPPQ 234


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 23  DTVLAPRGSFLY 34
           +TV A  G+FLY
Sbjct: 255 ETVSALNGAFLY 266


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query: 36  SIVHRRNTNVEKAPTP 51
           +++  RNT  E+ P P
Sbjct: 85  TVLSLRNTQEEEPPDP 100


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.129    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,363
Number of Sequences: 317
Number of extensions: 772
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 59
length of database: 114,650
effective HSP length: 39
effective length of query: 20
effective length of database: 102,287
effective search space:  2045740
effective search space used:  2045740
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.2 bits)
S2: 34 (17.8 bits)