Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002323-TA|BGIBMGA002323-PA|undefined
(59 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 0.22
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 20 2.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 20 2.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 20 2.0
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 20 2.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 20 2.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 20 2.7
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 20 2.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 19 3.6
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 19 4.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 19 4.7
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 19 4.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 19 4.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 19 4.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 19 6.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 19 6.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 19 6.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 19 6.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 19 6.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 19 6.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 19 6.2
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 18 8.2
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 18 8.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 0.22
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 29 RGSFLYNSIVHRRNTNVEKAPTPPP 53
RGS S+ RN V +P PPP
Sbjct: 1837 RGSVGRRSVGSARNIPVSGSPEPPP 1861
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.0
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 7 SNNNADPTPLPVRHNYDTVLAPRGSFLYNSIVHRRNTNVEKAPTPPP 53
SNNN+ +NY+ + Y + + N+E+ P P P
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNNNYNTN-YKKLQYYNIINIEQIPVPVP 128
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
YN ++ N+E+ P P P
Sbjct: 108 YNKKLYYNIINIEQIPVPVP 127
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
YN ++ N+E+ P P P
Sbjct: 108 YNKKLYYNIINIEQIPVPVP 127
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 2.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
YN ++ N+E+ P P P
Sbjct: 328 YNKKLYYNIINIEQIPVPVP 347
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 2.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
YN ++ N+E+ P P P
Sbjct: 332 YNKKLYYNIINIEQIPVPVP 351
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 19.8 bits (39), Expect = 2.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 33 LYNSIVHRRNTNVEKAPTPPP 53
L N ++ +T + AP PPP
Sbjct: 327 LVNIVLGDSDTPPKPAPPPPP 347
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C
protein.
Length = 548
Score = 19.8 bits (39), Expect = 2.7
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 35 NSIVHRRNTNVEKAPTP 51
+SIV RR+ + ++P+P
Sbjct: 30 SSIVDRRSPSSSRSPSP 46
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.4 bits (38), Expect = 3.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 3 LDNDSNNNADPTPLPVRHNYDTVLAPRGSFLYNSIVHRRNTNVEK 47
L + SNN N ++ + + L S+++R N ++EK
Sbjct: 609 LSSGSNNQTSSASRENTSNTTSMESFKPPTLTESLLNRHNEDMEK 653
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 19.0 bits (37), Expect = 4.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 31 SFLYNSIVHRRNTNVEK 47
S L N +H N N +K
Sbjct: 83 SSLSNKTIHNNNNNYKK 99
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 19.0 bits (37), Expect = 4.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 31 SFLYNSIVHRRNTNVEK 47
S L N +H N N +K
Sbjct: 83 SSLSNKTIHNNNNNYKK 99
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 19.0 bits (37), Expect = 4.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 31 SFLYNSIVHRRNTNVEK 47
S L N +H N N +K
Sbjct: 83 SSLSNKTIHNNNNNYKK 99
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 19.0 bits (37), Expect = 4.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 31 SFLYNSIVHRRNTNVEK 47
S L N +H N N +K
Sbjct: 83 SSLSNKTIHNNNNNYKK 99
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 19.0 bits (37), Expect = 4.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 31 SFLYNSIVHRRNTNVEK 47
S L N +H N N +K
Sbjct: 316 SSLSNKTIHNNNNNYKK 332
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 6.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
Y + + N+E+ P P P
Sbjct: 105 YKKLQYYNIINIEQIPVPVP 124
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 6.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
Y + + N+E+ P P P
Sbjct: 105 YKKLQYYNIINIEQIPVPVP 124
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 6.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
Y + + N+E+ P P P
Sbjct: 105 YKKLQYYNIINIEQIPVPVP 124
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 6.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
Y + + N+E+ P P P
Sbjct: 105 YKKLQYYNIINIEQIPVPVP 124
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 6.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
Y + + N+E+ P P P
Sbjct: 105 YKKLQYYNIINIEQIPVPVP 124
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 6.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
Y + + N+E+ P P P
Sbjct: 105 YKKLQYYNIINIEQIPVPVP 124
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 6.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 34 YNSIVHRRNTNVEKAPTPPP 53
Y + + N+E+ P P P
Sbjct: 105 YKKLQYYNIINIEQIPVPVP 124
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 18.2 bits (35), Expect = 8.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 22 YDTVLAPRGSFLYNSIVHRRN 42
Y LAP FL+ S+ + N
Sbjct: 272 YSPDLAPSDYFLFRSLQNSLN 292
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 18.2 bits (35), Expect = 8.2
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 3 LDNDSNNNADPTPLPVRHNYD 23
LD+ NN P P H +D
Sbjct: 142 LDSGIINNTQPMCSPKLHVFD 162
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.310 0.129 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,414
Number of Sequences: 429
Number of extensions: 1591
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of query: 59
length of database: 140,377
effective HSP length: 39
effective length of query: 20
effective length of database: 123,646
effective search space: 2472920
effective search space used: 2472920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.6 bits)
S2: 35 (18.2 bits)
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