GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002322-TA|BGIBMGA002322-PA|undefined
         (754 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    27   1.8  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    27   2.4  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    27   2.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   3.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   5.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   7.4  

>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 662 KDLIADQIPLLKFGLDVHASRAPPAQEEMHAHLMERFRTVQKHVHQRYGRKTCDFETESQ 721
           +DL+A  +   +  LD+ A+++      + A L     +++  +H R    T   + E Q
Sbjct: 152 QDLMAKVVGQNRRSLDLIAAKSYFYHSRV-AELNNDLESIRSFLHSRLRTATLRNDFEGQ 210

Query: 722 EVQLRITLRNSLH 734
            V +   LRN LH
Sbjct: 211 AVLINCLLRNYLH 223


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 54  HLQHYVMLHALRLLSTTIQDRSTRRRHGV----TGQSPRTM--QGLVQCRG---GLGTSA 104
           HL  + +   + L+S  + + +  R  G     TGQ P ++   G  Q R    G  T+ 
Sbjct: 314 HLYDFDLTTHIMLVSDWLHEDAAERYPGRLAVNTGQDPESLLINGKGQFRDPNTGFMTNT 373

Query: 105 PLQLETLTAARKQRVKQL 122
           PL++ T+T  R+ R + +
Sbjct: 374 PLEIFTITPGRRYRFRMI 391


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 54  HLQHYVMLHALRLLSTTIQDRSTRRRHGV----TGQSPRTM--QGLVQCRG---GLGTSA 104
           HL  + +   + L+S  + + +  R  G     TGQ P ++   G  Q R    G  T+ 
Sbjct: 314 HLYDFDLTTHIMLVSDWLHEDAAERYPGRLAVNTGQDPESLLINGKGQFRDPNTGFMTNT 373

Query: 105 PLQLETLTAARKQRVKQL 122
           PL++ T+T  R+ R + +
Sbjct: 374 PLEIFTITPGRRYRFRMI 391


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 296  VHKLASMYRAAQQWTEAGLTLRLHAKLLSWSHDPLPPRL 334
            + +L  +  A   W E G  L  H+    W   P P R+
Sbjct: 1054 LEELCRLLDAGSGWRELGSLLDFHSFFTVWEQAPSPARM 1092


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 447  YRGNEYEQLQEFIERMLDEWPDAEVLPRLDPPGEDITESEGQYL 490
            Y+ + YEQ     +    +W    +   L+   E+  E EGQ++
Sbjct: 994  YQNDYYEQFGNKNQEEFQKWSTTRIAKLLNIDPEEAEELEGQFM 1037


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 627 LDSAVQGGIVNYENSFLTPAYESRHPEH-------AALLVELKDLIADQIPLLKFGLDVH 679
           L+    GGI +Y    +  ++  +H +          LL+E  +L   +   +K G+ V 
Sbjct: 424 LNEVFTGGISSYSLILMCISFLQQHHQKPNACSNLGVLLIEFFELYGRKFNYMKIGISVK 483

Query: 680 ASRAPPAQEEMHAHLMERFR 699
           + R  P +EE+   +++  R
Sbjct: 484 SGRYIP-KEELQREMIDGHR 502


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,233
Number of Sequences: 2123
Number of extensions: 32405
Number of successful extensions: 90
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 86
Number of HSP's gapped (non-prelim): 7
length of query: 754
length of database: 516,269
effective HSP length: 69
effective length of query: 685
effective length of database: 369,782
effective search space: 253300670
effective search space used: 253300670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)