Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002322-TA|BGIBMGA002322-PA|undefined
(754 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 268 7e-72
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 268 7e-72
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 268 7e-72
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 63 8e-10
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 6.9
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 6.9
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 6.9
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 268 bits (658), Expect = 7e-72
Identities = 187/681 (27%), Positives = 326/681 (47%), Gaps = 38/681 (5%)
Query: 39 LVQRPVFRPHWADMLHLQHYVMLHALRLLSTTIQDRSTRRRHGVT--GQSPRTMQGLVQC 96
L+ R F W DM+ LQ+ V+ +LR + + +Q + + V + T+ V
Sbjct: 982 LLNRNAFPSTWKDMIMLQNKVIHKSLRFVMSAVQTFFSNDKFCVEMWREYMVTVVSFVTQ 1041
Query: 97 RGGLGTSAPLQLETLTAARKQRVKQLYGDIRRGLAQCLSDMWYSLG-EHKRSFIPCLVTP 155
G L + K + + +R+ A+ L MW+ L K ++IP ++
Sbjct: 1042 EG---------LNSKHEWMKNEDEDMRIQLRKAAAKDLRSMWFRLTPSQKLNYIPSMIGS 1092
Query: 156 FLEVSFLRDDEVRNTTIPIFFDMMQTEYNHSVAGGEKENYLKELESELIDKLDVLVERGC 215
FL+VS + DDE R TIPIFFDMMQTEYN S + E SEL+ +LD V++
Sbjct: 1093 FLKVSLVDDDETREATIPIFFDMMQTEYNTSASRS-----FTEFASELVSQLDTNVDQHS 1147
Query: 216 GDLQWRGRFVTSXXXXXXXXXXXXXXXXXXXXXXXXXQLDTLLQYRAAALRSPTP---HR 272
++ F L L++Y A +S
Sbjct: 1148 ATKGFKEHFRQLSITLCQSDKELMANGGEELIERIDRLLTALIEYHEVASKSLVECVDSL 1207
Query: 273 MHLTTTVLHFYQEIERPHMYIRYVHKLASMYRAAQQWTEAGLTLRLHAKLLSWSHDPLPP 332
M T ++ +Y + +Y++Y++KL ++ + EA TL HA +L++ D LP
Sbjct: 1208 MSRTVQLMRYYNQYSHKELYVKYIYKLYDLHTSYGNKIEAAKTLLRHATMLTFDDDALPQ 1267
Query: 333 RLRHPTLNHDDHTTHRELKEHLYFEIAELLKRGGLWELAVDIVKELVSVYEEEALGYGPL 392
L +LN HR+LKE L E L +G WE A+ + +LV VY+ + Y L
Sbjct: 1268 WLIARSLNRH-RELHRQLKEDLMEEAGNLFSKGEDWEDALIVYNQLVPVYQNIIMDYDKL 1326
Query: 393 AELHSQLAEFYASMLQSRRSHPGYFRVIYHGKGFPEILRKPLGCLSTIPSQGFIYRGNEY 452
A L ++A+ Y S+ ++ R++ Y+ V ++G+GFP L F++R +
Sbjct: 1327 AGLLQKIAQLYTSISRTERAYFYYYLVAFYGQGFPAYLN----------GHKFVFRSEKL 1376
Query: 453 EQLQEFIERMLDEWPDAEVLPRLDPPGEDITESEGQYLQINAVDPIMSDKLKRLSGKPVA 512
E EF++R++ + + E + + D P + +S G+Y+Q+ +DPI + V
Sbjct: 1377 EMHGEFMQRIMKMYDNPEKIMKTD-PCPHLVDSPGRYIQVFNIDPI-GTGCSFENNPEVK 1434
Query: 513 EQILQYYKHNDVDKFYFSRPFDRPEESLSDSTEDLNKNEFARRWLERTELEISDKLPGIL 572
I +Y+++ ++ F +S+ +R + + +EF R WL R ++ +D LP L
Sbjct: 1435 PVIKKYFRYYNIQTFEYSKVEERKDTKWTSIDP---SSEFMRNWLVRRRIKTADSLPTDL 1491
Query: 573 RWFPVVK-QRTYWVSPIEVAVESLRQTNRTLKSVAFEAR-NPDTPLNPLTMRLLGILDSA 630
R+ +V+ +V+P++ AVE +R+ N+ L A A NP+ L L+ +LG++ +A
Sbjct: 1492 RFTEIVELSDPIYVTPLQNAVEQMRKKNKELNETAASAESNPNFDLKLLSRDILGVVSAA 1551
Query: 631 VQGGIVNYENSFLTPAYESRHPEHAALLVELKDLIADQIPLLKFGLDVHASRAPPAQEEM 690
V GG+ NYE F ++++EL LI +Q+ +L++ VHASR +
Sbjct: 1552 VMGGVKNYEVFFTEACRNICECGEQSVIMELSSLIIEQVEILEYCCYVHASRCQGEARAI 1611
Query: 691 HAHLMERFRTVQKHVHQRYGR 711
+ L + F + +++V + +G+
Sbjct: 1612 NTMLADSFDSHRRYVEENFGK 1632
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 268 bits (658), Expect = 7e-72
Identities = 187/681 (27%), Positives = 326/681 (47%), Gaps = 38/681 (5%)
Query: 39 LVQRPVFRPHWADMLHLQHYVMLHALRLLSTTIQDRSTRRRHGVT--GQSPRTMQGLVQC 96
L+ R F W DM+ LQ+ V+ +LR + + +Q + + V + T+ V
Sbjct: 982 LLNRNAFPSTWKDMIMLQNKVIHKSLRFVMSAVQTFFSNDKFCVEMWREYMVTVVSFVTQ 1041
Query: 97 RGGLGTSAPLQLETLTAARKQRVKQLYGDIRRGLAQCLSDMWYSLG-EHKRSFIPCLVTP 155
G L + K + + +R+ A+ L MW+ L K ++IP ++
Sbjct: 1042 EG---------LNSKHEWMKNEDEDMRIQLRKAAAKDLRSMWFRLTPSQKLNYIPSMIGS 1092
Query: 156 FLEVSFLRDDEVRNTTIPIFFDMMQTEYNHSVAGGEKENYLKELESELIDKLDVLVERGC 215
FL+VS + DDE R TIPIFFDMMQTEYN S + E SEL+ +LD V++
Sbjct: 1093 FLKVSLVDDDETREATIPIFFDMMQTEYNTSASRS-----FTEFASELVSQLDTNVDQHS 1147
Query: 216 GDLQWRGRFVTSXXXXXXXXXXXXXXXXXXXXXXXXXQLDTLLQYRAAALRSPTP---HR 272
++ F L L++Y A +S
Sbjct: 1148 ATKGFKEHFRQLSITLCQSDKELMANGGEELIERIDRLLTALIEYHEVASKSLVECVDSL 1207
Query: 273 MHLTTTVLHFYQEIERPHMYIRYVHKLASMYRAAQQWTEAGLTLRLHAKLLSWSHDPLPP 332
M T ++ +Y + +Y++Y++KL ++ + EA TL HA +L++ D LP
Sbjct: 1208 MSRTVQLMRYYNQYSHKELYVKYIYKLYDLHTSYGNKIEAAKTLLRHATMLTFDDDALPQ 1267
Query: 333 RLRHPTLNHDDHTTHRELKEHLYFEIAELLKRGGLWELAVDIVKELVSVYEEEALGYGPL 392
L +LN HR+LKE L E L +G WE A+ + +LV VY+ + Y L
Sbjct: 1268 WLIARSLNRH-RELHRQLKEDLMEEAGNLFSKGEDWEDALIVYNQLVPVYQNIIMDYDKL 1326
Query: 393 AELHSQLAEFYASMLQSRRSHPGYFRVIYHGKGFPEILRKPLGCLSTIPSQGFIYRGNEY 452
A L ++A+ Y S+ ++ R++ Y+ V ++G+GFP L F++R +
Sbjct: 1327 AGLLQKIAQLYTSISRTERAYFYYYLVAFYGQGFPAYLN----------GHKFVFRSEKL 1376
Query: 453 EQLQEFIERMLDEWPDAEVLPRLDPPGEDITESEGQYLQINAVDPIMSDKLKRLSGKPVA 512
E EF++R++ + + E + + D P + +S G+Y+Q+ +DPI + V
Sbjct: 1377 EMHGEFMQRIMKMYDNPEKIMKTD-PCPHLVDSPGRYIQVFNIDPI-GTGCSFENNPEVK 1434
Query: 513 EQILQYYKHNDVDKFYFSRPFDRPEESLSDSTEDLNKNEFARRWLERTELEISDKLPGIL 572
I +Y+++ ++ F +S+ +R + + +EF R WL R ++ +D LP L
Sbjct: 1435 PVIKKYFRYYNIQTFEYSKVEERKDTKWTSIDP---SSEFMRNWLVRRRIKTADSLPTDL 1491
Query: 573 RWFPVVK-QRTYWVSPIEVAVESLRQTNRTLKSVAFEAR-NPDTPLNPLTMRLLGILDSA 630
R+ +V+ +V+P++ AVE +R+ N+ L A A NP+ L L+ +LG++ +A
Sbjct: 1492 RFTEIVELSDPIYVTPLQNAVEQMRKKNKELNETAASAESNPNFDLKLLSRDILGVVSAA 1551
Query: 631 VQGGIVNYENSFLTPAYESRHPEHAALLVELKDLIADQIPLLKFGLDVHASRAPPAQEEM 690
V GG+ NYE F ++++EL LI +Q+ +L++ VHASR +
Sbjct: 1552 VMGGVKNYEVFFTEACRNICECGEQSVIMELSSLIIEQVEILEYCCYVHASRCQGEARAI 1611
Query: 691 HAHLMERFRTVQKHVHQRYGR 711
+ L + F + +++V + +G+
Sbjct: 1612 NTMLADSFDSHRRYVEENFGK 1632
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 268 bits (658), Expect = 7e-72
Identities = 187/681 (27%), Positives = 326/681 (47%), Gaps = 38/681 (5%)
Query: 39 LVQRPVFRPHWADMLHLQHYVMLHALRLLSTTIQDRSTRRRHGVT--GQSPRTMQGLVQC 96
L+ R F W DM+ LQ+ V+ +LR + + +Q + + V + T+ V
Sbjct: 982 LLNRNAFPSTWKDMIMLQNKVIHKSLRFVMSAVQTFFSNDKFCVEMWREYMVTVVSFVTQ 1041
Query: 97 RGGLGTSAPLQLETLTAARKQRVKQLYGDIRRGLAQCLSDMWYSLG-EHKRSFIPCLVTP 155
G L + K + + +R+ A+ L MW+ L K ++IP ++
Sbjct: 1042 EG---------LNSKHEWMKNEDEDMRIQLRKAAAKDLRSMWFRLTPSQKLNYIPSMIGS 1092
Query: 156 FLEVSFLRDDEVRNTTIPIFFDMMQTEYNHSVAGGEKENYLKELESELIDKLDVLVERGC 215
FL+VS + DDE R TIPIFFDMMQTEYN S + E SEL+ +LD V++
Sbjct: 1093 FLKVSLVDDDETREATIPIFFDMMQTEYNTSASRS-----FTEFASELVSQLDTNVDQHS 1147
Query: 216 GDLQWRGRFVTSXXXXXXXXXXXXXXXXXXXXXXXXXQLDTLLQYRAAALRSPTP---HR 272
++ F L L++Y A +S
Sbjct: 1148 ATKGFKEHFRQLSITLCQSDKELMANGGEELIERIDRLLTALIEYHEVASKSLVECVDSL 1207
Query: 273 MHLTTTVLHFYQEIERPHMYIRYVHKLASMYRAAQQWTEAGLTLRLHAKLLSWSHDPLPP 332
M T ++ +Y + +Y++Y++KL ++ + EA TL HA +L++ D LP
Sbjct: 1208 MSRTVQLMRYYNQYSHKELYVKYIYKLYDLHTSYGNKIEAAKTLLRHATMLTFDDDALPQ 1267
Query: 333 RLRHPTLNHDDHTTHRELKEHLYFEIAELLKRGGLWELAVDIVKELVSVYEEEALGYGPL 392
L +LN HR+LKE L E L +G WE A+ + +LV VY+ + Y L
Sbjct: 1268 WLIARSLNRH-RELHRQLKEDLMEEAGNLFSKGEDWEDALIVYNQLVPVYQNIIMDYDKL 1326
Query: 393 AELHSQLAEFYASMLQSRRSHPGYFRVIYHGKGFPEILRKPLGCLSTIPSQGFIYRGNEY 452
A L ++A+ Y S+ ++ R++ Y+ V ++G+GFP L F++R +
Sbjct: 1327 AGLLQKIAQLYTSISRTERAYFYYYLVAFYGQGFPAYLN----------GHKFVFRSEKL 1376
Query: 453 EQLQEFIERMLDEWPDAEVLPRLDPPGEDITESEGQYLQINAVDPIMSDKLKRLSGKPVA 512
E EF++R++ + + E + + D P + +S G+Y+Q+ +DPI + V
Sbjct: 1377 EMHGEFMQRIMKMYDNPEKIMKTD-PCPHLVDSPGRYIQVFNIDPI-GTGCSFENNPEVK 1434
Query: 513 EQILQYYKHNDVDKFYFSRPFDRPEESLSDSTEDLNKNEFARRWLERTELEISDKLPGIL 572
I +Y+++ ++ F +S+ +R + + +EF R WL R ++ +D LP L
Sbjct: 1435 PVIKKYFRYYNIQTFEYSKVEERKDTKWTSIDP---SSEFMRNWLVRRRIKTADSLPTDL 1491
Query: 573 RWFPVVK-QRTYWVSPIEVAVESLRQTNRTLKSVAFEAR-NPDTPLNPLTMRLLGILDSA 630
R+ +V+ +V+P++ AVE +R+ N+ L A A NP+ L L+ +LG++ +A
Sbjct: 1492 RFTEIVELSDPIYVTPLQNAVEQMRKKNKELNETAASAESNPNFDLKLLSRDILGVVSAA 1551
Query: 631 VQGGIVNYENSFLTPAYESRHPEHAALLVELKDLIADQIPLLKFGLDVHASRAPPAQEEM 690
V GG+ NYE F ++++EL LI +Q+ +L++ VHASR +
Sbjct: 1552 VMGGVKNYEVFFTEACRNICECGEQSVIMELSSLIIEQVEILEYCCYVHASRCQGEARAI 1611
Query: 691 HAHLMERFRTVQKHVHQRYGR 711
+ L + F + +++V + +G+
Sbjct: 1612 NTMLADSFDSHRRYVEENFGK 1632
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical protein
F46H5.4 protein.
Length = 2018
Score = 62.9 bits (146), Expect = 8e-10
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 410 RRSHPGYFRVIYHGKGFPEILRKPLGCLSTIPSQGFIYRGNEYEQLQEFIERM----LDE 465
+R +FRV ++GK F G L+ F+Y+ + + +L E R+ +
Sbjct: 1726 KRCFGSFFRVAFYGKLF--------GALNNAE---FVYKESAFSKLNEISNRLETFYTNM 1774
Query: 466 WPDAEVLPRLD--PPGEDITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
+ + V+ D P + E Y+QI VD +SD K E+ + + N+
Sbjct: 1775 YGEGNVVVLKDSKPVQLEKLNPEKAYIQITFVDVYLSDNEKM-------ERTTYFTRRNN 1827
Query: 524 VDKFYFSRPFDRPEESLSDSTEDLNKNEFARRWLERTELEISDKLPGILRWFPVVKQRTY 583
V++FYF P+ + E + E A ++ +RT L + + P I VV +
Sbjct: 1828 VNRFYFEAPY---------TMEGRAQGELAAQYKKRTILTVENSFPYIKTRLQVVNRSVK 1878
Query: 584 WVSPIEVAVESLRQTNRTLKSVAFEARNPDTPLNPLTMRLLGILDSAVQGGIVNYENSFL 643
SPIEVA+E + + R L S A + +NP L+M + G + + V G + N FL
Sbjct: 1879 DFSPIEVAIEDIEKKTREL-SAAAQHKNP----KMLSMFIQGSIGTTVNQGPLEIANVFL 1933
Query: 644 TPA 646
A
Sbjct: 1934 ANA 1936
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.9 bits (64), Expect = 6.9
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 8182 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 8236
Query: 524 VDKFYFSRPFDRPEESLSDSTEDLNKNE 551
EE + L+KNE
Sbjct: 8237 GKPIVI-----EGEEPTGPEDQKLSKNE 8259
Score = 29.9 bits (64), Expect = 6.9
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 9226 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 9280
Query: 524 VDKFYFSRPFDRPEESLSDSTEDLNKNE 551
EE + L+KNE
Sbjct: 9281 GKPIVI-----EGEEPTGPEDQKLSKNE 9303
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 7408 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 7462
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 9945 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 9999
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.9 bits (64), Expect = 6.9
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 8227 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 8281
Query: 524 VDKFYFSRPFDRPEESLSDSTEDLNKNE 551
EE + L+KNE
Sbjct: 8282 GKPIVI-----EGEEPTGPEDQKLSKNE 8304
Score = 29.9 bits (64), Expect = 6.9
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 9271 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 9325
Query: 524 VDKFYFSRPFDRPEESLSDSTEDLNKNE 551
EE + L+KNE
Sbjct: 9326 GKPIVI-----EGEEPTGPEDQKLSKNE 9348
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 7453 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 7507
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 9990 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 10044
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.9 bits (64), Expect = 6.9
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 8227 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 8281
Query: 524 VDKFYFSRPFDRPEESLSDSTEDLNKNE 551
EE + L+KNE
Sbjct: 8282 GKPIVI-----EGEEPTGPEDQKLSKNE 8304
Score = 29.9 bits (64), Expect = 6.9
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 9271 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 9325
Query: 524 VDKFYFSRPFDRPEESLSDSTEDLNKNE 551
EE + L+KNE
Sbjct: 9326 GKPIVI-----EGEEPTGPEDQKLSKNE 9348
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 7453 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 7507
Score = 29.5 bits (63), Expect = 9.2
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 467 PDAEVLPRLDPPGE---DITESEGQYLQINAVDPIMSDKLKRLSGKPVAEQILQYYKHND 523
PD +VLP D G +T S+GQ L +A P++ D+ SGKP+ Y N+
Sbjct: 9990 PDGQVLPT-DASGNYIYPVTSSDGQVLPTDAEKPVIVDQ----SGKPLPTDASGNYIDNN 10044
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,345,181
Number of Sequences: 27539
Number of extensions: 781125
Number of successful extensions: 1811
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1773
Number of HSP's gapped (non-prelim): 19
length of query: 754
length of database: 12,573,161
effective HSP length: 87
effective length of query: 667
effective length of database: 10,177,268
effective search space: 6788237756
effective search space used: 6788237756
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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