GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002321-TA|BGIBMGA002321-PA|undefined
         (767 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    25   2.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   7.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   7.8  

>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 98  NKLTEHLLIRWPTPNFATTNVVFTDFGSDFMKNEKVYLVCHVVRIGSM 145
           N++T+ +L      +F T +     +G D++ +E V LV    R+G +
Sbjct: 70  NRITQPVLFWIHGGDFVTGSGTSEMYGPDYLMSENVVLVTINYRLGML 117


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 480 TPGTLRPALTQLLHVPSEELVKFLQDILDTLFSILTQVEED 520
           TP   R A T+L  +     +++L+  L  +F  LTQ E+D
Sbjct: 180 TPMVRRAAATKLGELAQVVELEYLKTDLIPMFLSLTQDEQD 220


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 110 TPNFATTNVVFTDFGSDFMKNEKVY-LVCHVVRIGSMDAQNVDHRRSS---VAQPVSMST 165
           +P F      ++ +GS F+ ++ +Y  V   V++ +     + + R+S   + +P S S 
Sbjct: 219 SPTFTQQQTQYSQYGSWFLPHQPIYPAVTATVQLSTCTRTTLKNNRASPYPMQRPKSASL 278

Query: 166 S 166
           S
Sbjct: 279 S 279


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.136    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,145
Number of Sequences: 317
Number of extensions: 6505
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 767
length of database: 114,650
effective HSP length: 62
effective length of query: 705
effective length of database: 94,996
effective search space: 66972180
effective search space used: 66972180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)