GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002321-TA|BGIBMGA002321-PA|undefined
         (767 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    27   1.9  
AY324308-1|AAQ89693.1|  134|Anopheles gambiae insulin-like pepti...    26   3.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   5.7  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 144 SMDAQNVDHRRSSVAQPVSMSTSAGAMRRPFGVAC 178
           S+ A    H  +S +QP+SM+TSA  + +  G  C
Sbjct: 87  SIVAVQSQHHTASDSQPLSMNTSASTVTQQVGRHC 121


>AY324308-1|AAQ89693.1|  134|Anopheles gambiae insulin-like
          peptide 2 precursor protein.
          Length = 134

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 32 MSTYRLNALHDEANTRIDKNMETTPVT 58
          ++ YR + +HD+AN R+   + T P T
Sbjct: 66 LTHYRTDYVHDQANQRVKVEVATLPDT 92


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 5.7
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 505  DILDTLFSILTQVEEDQEYYSDKSYGVLVFE-CLLRVISLVADHKYQH 551
            D L  LF        + E Y D+S  VLV++   L+V S V  H   H
Sbjct: 1781 DFLTNLFPTQDGFYYESEQYPDQSVYVLVYDKRKLKVASYVKTHHGDH 1828


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.136    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,593
Number of Sequences: 2123
Number of extensions: 28730
Number of successful extensions: 92
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 90
Number of HSP's gapped (non-prelim): 3
length of query: 767
length of database: 516,269
effective HSP length: 69
effective length of query: 698
effective length of database: 369,782
effective search space: 258107836
effective search space used: 258107836
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)