Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002321-TA|BGIBMGA002321-PA|undefined
(767 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 142 1e-33
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 142 1e-33
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 142 1e-33
AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical... 34 0.43
U53332-4|AAK31535.2| 821|Caenorhabditis elegans Related to yeas... 31 3.1
DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar prot... 31 3.1
AF016676-9|AAG24107.1| 394|Caenorhabditis elegans Hypothetical ... 29 9.3
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 142 bits (343), Expect = 1e-33
Identities = 168/689 (24%), Positives = 294/689 (42%), Gaps = 52/689 (7%)
Query: 13 LDMELAVRNSNGQLVDPLKMSTYRLNALHDEANTRIDKNMETTPVTPNVTPAGVRTFTVC 72
L ++ +RN G +D +S R H + R+ M P NVT + +
Sbjct: 155 LGQDVVIRNEEGVPLDVESLSLLRTYEAHISSKGRVGSLMREKP--ENVTINDSFSLLLS 212
Query: 73 VRVHNFVCRVADVAELSLSLHDAAGNKLT-EHLLIRWPTPNFATTNV----VFTDFGSDF 127
++ C+ + E+S+SL+D T + W + + T++ +FTDF +
Sbjct: 213 IKSVELHCKYS--CEISISLYDLDKKMFTTDSYTFLWNSGSGKHTDLNLKALFTDFAKED 270
Query: 128 MKNEKVYLVCHVVRIGSMDAQNVDHRRSSVAQPVSMSTSAGAMRRPFGVACADIKR-HLT 186
++ +K +V VV + +++ N R+ + T R+ + ++ L
Sbjct: 271 IQ-KKYLMVTRVVHVSPIESSNATMRKHGHHEATIPKTFY--CRQSYASDIMEMSSIFLA 327
Query: 187 SDNPDKHIQVPFYAYEKENLDALLKKVMA-NRELKDAKHSQG--LWVSIHLVEGDLKQIR 243
+ +V F E E L LK A NR K+ + L +S LV G++ QI+
Sbjct: 328 GVGHEAKERVIFLNREPE-LPLSLKAYHATNRIPKNLSNDMETKLLISTQLVPGNVSQIK 386
Query: 244 EENPHIVVN--TVVARKMGFPEVILPGDARNDLYVTLCXXXXXXXXXXXXERNIELVARV 301
+PH+ + R+ V + D+RN++Y+TL +RNIE V
Sbjct: 387 ARHPHLFSRCPAAILRRADRTAVSIE-DSRNEMYITLMQAELSGKSS---DRNIEARLHV 442
Query: 302 VDQHGRTIPGV---ISIGAGVPLANEYTSLVYYHDDRPRWQEVFKVCLNIEEFKDAHLVF 358
V+ +G + V IS+ G L+ Y S+V YH D+P W E K+ L D +L
Sbjct: 443 VESNGHVMENVFETISV-TGSQLSTVYKSIVVYHTDKPMWTEPIKIALPSCASHDVYLRI 501
Query: 359 LCRHRSSNEAKDRAERHFALAFLRLMQREGTTTPDTNHNLCVYKIDNKRSNPAEVEKEAA 418
L + + + + FA+A ++L+ R D H+L VYKID NP E+
Sbjct: 502 LFYSKKAYDKPKPEKGPFAIAHVQLI-RSSALLCDGEHDLAVYKID----NPGSHFDESN 556
Query: 419 AVCLGLPSKRDEL--PAGAERGLTRGVLSLIHRDTLTVATKLCSTKLTQKEEILGVLKWS 476
+ LP R L G+ + ++G SL + + ++T CS+ LTQ E +L VL+W
Sbjct: 557 VHYMNLPDTRRTLKESIGSAKPHSQG-FSLSDKSFVMISTHSCSSMLTQNEHLLNVLRWR 615
Query: 477 THRTPGTLR-PALTQLLHVPSEELVKFLQDILDTLFSILTQVEEDQEYYSDKSYGVLVFE 535
+ T AL Q + E+++F +LD LF ++ D+E S+K +VF+
Sbjct: 616 VNCVNLTSSLVALAQPIGDTEHEMIRFFSHLLDALF----EIWHDRE-TSEK----VVFD 666
Query: 536 CLLRVISLVADHK-YQHFQPVLHVYIDESFCDALAYESLITVMVWVIRTANSSEAAVKRL 594
++ V+ + + + Y + VY+ + A + L + +VI + S +
Sbjct: 667 VIVAVLRICEEPRHYPQAAKIFEVYLKRFSFTSAALKILKCLNHYVISDSEDSNEKARNA 726
Query: 595 LVCMKCXXXXXXXXXXXXXXXXALGDSAADDGFKALFDTLLEALVWLMRCGEHVLTCQGS 654
M D + +K +++LV LM + +T Q +
Sbjct: 727 FKVMGPLFKLVVVSKKCGIKFEEFDD--FEKTYKQYLREFMKSLVALMSEKKAKMTVQNT 784
Query: 655 ALKYFPHAVPHIIK---VYPDTELCAYII 680
ALK P + + + V P+ LC +I+
Sbjct: 785 ALKSIPTIIDLLNESDSVSPE-NLCGFIV 812
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 142 bits (343), Expect = 1e-33
Identities = 168/689 (24%), Positives = 294/689 (42%), Gaps = 52/689 (7%)
Query: 13 LDMELAVRNSNGQLVDPLKMSTYRLNALHDEANTRIDKNMETTPVTPNVTPAGVRTFTVC 72
L ++ +RN G +D +S R H + R+ M P NVT + +
Sbjct: 155 LGQDVVIRNEEGVPLDVESLSLLRTYEAHISSKGRVGSLMREKP--ENVTINDSFSLLLS 212
Query: 73 VRVHNFVCRVADVAELSLSLHDAAGNKLT-EHLLIRWPTPNFATTNV----VFTDFGSDF 127
++ C+ + E+S+SL+D T + W + + T++ +FTDF +
Sbjct: 213 IKSVELHCKYS--CEISISLYDLDKKMFTTDSYTFLWNSGSGKHTDLNLKALFTDFAKED 270
Query: 128 MKNEKVYLVCHVVRIGSMDAQNVDHRRSSVAQPVSMSTSAGAMRRPFGVACADIKR-HLT 186
++ +K +V VV + +++ N R+ + T R+ + ++ L
Sbjct: 271 IQ-KKYLMVTRVVHVSPIESSNATMRKHGHHEATIPKTFY--CRQSYASDIMEMSSIFLA 327
Query: 187 SDNPDKHIQVPFYAYEKENLDALLKKVMA-NRELKDAKHSQG--LWVSIHLVEGDLKQIR 243
+ +V F E E L LK A NR K+ + L +S LV G++ QI+
Sbjct: 328 GVGHEAKERVIFLNREPE-LPLSLKAYHATNRIPKNLSNDMETKLLISTQLVPGNVSQIK 386
Query: 244 EENPHIVVN--TVVARKMGFPEVILPGDARNDLYVTLCXXXXXXXXXXXXERNIELVARV 301
+PH+ + R+ V + D+RN++Y+TL +RNIE V
Sbjct: 387 ARHPHLFSRCPAAILRRADRTAVSIE-DSRNEMYITLMQAELSGKSS---DRNIEARLHV 442
Query: 302 VDQHGRTIPGV---ISIGAGVPLANEYTSLVYYHDDRPRWQEVFKVCLNIEEFKDAHLVF 358
V+ +G + V IS+ G L+ Y S+V YH D+P W E K+ L D +L
Sbjct: 443 VESNGHVMENVFETISV-TGSQLSTVYKSIVVYHTDKPMWTEPIKIALPSCASHDVYLRI 501
Query: 359 LCRHRSSNEAKDRAERHFALAFLRLMQREGTTTPDTNHNLCVYKIDNKRSNPAEVEKEAA 418
L + + + + FA+A ++L+ R D H+L VYKID NP E+
Sbjct: 502 LFYSKKAYDKPKPEKGPFAIAHVQLI-RSSALLCDGEHDLAVYKID----NPGSHFDESN 556
Query: 419 AVCLGLPSKRDEL--PAGAERGLTRGVLSLIHRDTLTVATKLCSTKLTQKEEILGVLKWS 476
+ LP R L G+ + ++G SL + + ++T CS+ LTQ E +L VL+W
Sbjct: 557 VHYMNLPDTRRTLKESIGSAKPHSQG-FSLSDKSFVMISTHSCSSMLTQNEHLLNVLRWR 615
Query: 477 THRTPGTLR-PALTQLLHVPSEELVKFLQDILDTLFSILTQVEEDQEYYSDKSYGVLVFE 535
+ T AL Q + E+++F +LD LF ++ D+E S+K +VF+
Sbjct: 616 VNCVNLTSSLVALAQPIGDTEHEMIRFFSHLLDALF----EIWHDRE-TSEK----VVFD 666
Query: 536 CLLRVISLVADHK-YQHFQPVLHVYIDESFCDALAYESLITVMVWVIRTANSSEAAVKRL 594
++ V+ + + + Y + VY+ + A + L + +VI + S +
Sbjct: 667 VIVAVLRICEEPRHYPQAAKIFEVYLKRFSFTSAALKILKCLNHYVISDSEDSNEKARNA 726
Query: 595 LVCMKCXXXXXXXXXXXXXXXXALGDSAADDGFKALFDTLLEALVWLMRCGEHVLTCQGS 654
M D + +K +++LV LM + +T Q +
Sbjct: 727 FKVMGPLFKLVVVSKKCGIKFEEFDD--FEKTYKQYLREFMKSLVALMSEKKAKMTVQNT 784
Query: 655 ALKYFPHAVPHIIK---VYPDTELCAYII 680
ALK P + + + V P+ LC +I+
Sbjct: 785 ALKSIPTIIDLLNESDSVSPE-NLCGFIV 812
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 142 bits (343), Expect = 1e-33
Identities = 168/689 (24%), Positives = 294/689 (42%), Gaps = 52/689 (7%)
Query: 13 LDMELAVRNSNGQLVDPLKMSTYRLNALHDEANTRIDKNMETTPVTPNVTPAGVRTFTVC 72
L ++ +RN G +D +S R H + R+ M P NVT + +
Sbjct: 155 LGQDVVIRNEEGVPLDVESLSLLRTYEAHISSKGRVGSLMREKP--ENVTINDSFSLLLS 212
Query: 73 VRVHNFVCRVADVAELSLSLHDAAGNKLT-EHLLIRWPTPNFATTNV----VFTDFGSDF 127
++ C+ + E+S+SL+D T + W + + T++ +FTDF +
Sbjct: 213 IKSVELHCKYS--CEISISLYDLDKKMFTTDSYTFLWNSGSGKHTDLNLKALFTDFAKED 270
Query: 128 MKNEKVYLVCHVVRIGSMDAQNVDHRRSSVAQPVSMSTSAGAMRRPFGVACADIKR-HLT 186
++ +K +V VV + +++ N R+ + T R+ + ++ L
Sbjct: 271 IQ-KKYLMVTRVVHVSPIESSNATMRKHGHHEATIPKTFY--CRQSYASDIMEMSSIFLA 327
Query: 187 SDNPDKHIQVPFYAYEKENLDALLKKVMA-NRELKDAKHSQG--LWVSIHLVEGDLKQIR 243
+ +V F E E L LK A NR K+ + L +S LV G++ QI+
Sbjct: 328 GVGHEAKERVIFLNREPE-LPLSLKAYHATNRIPKNLSNDMETKLLISTQLVPGNVSQIK 386
Query: 244 EENPHIVVN--TVVARKMGFPEVILPGDARNDLYVTLCXXXXXXXXXXXXERNIELVARV 301
+PH+ + R+ V + D+RN++Y+TL +RNIE V
Sbjct: 387 ARHPHLFSRCPAAILRRADRTAVSIE-DSRNEMYITLMQAELSGKSS---DRNIEARLHV 442
Query: 302 VDQHGRTIPGV---ISIGAGVPLANEYTSLVYYHDDRPRWQEVFKVCLNIEEFKDAHLVF 358
V+ +G + V IS+ G L+ Y S+V YH D+P W E K+ L D +L
Sbjct: 443 VESNGHVMENVFETISV-TGSQLSTVYKSIVVYHTDKPMWTEPIKIALPSCASHDVYLRI 501
Query: 359 LCRHRSSNEAKDRAERHFALAFLRLMQREGTTTPDTNHNLCVYKIDNKRSNPAEVEKEAA 418
L + + + + FA+A ++L+ R D H+L VYKID NP E+
Sbjct: 502 LFYSKKAYDKPKPEKGPFAIAHVQLI-RSSALLCDGEHDLAVYKID----NPGSHFDESN 556
Query: 419 AVCLGLPSKRDEL--PAGAERGLTRGVLSLIHRDTLTVATKLCSTKLTQKEEILGVLKWS 476
+ LP R L G+ + ++G SL + + ++T CS+ LTQ E +L VL+W
Sbjct: 557 VHYMNLPDTRRTLKESIGSAKPHSQG-FSLSDKSFVMISTHSCSSMLTQNEHLLNVLRWR 615
Query: 477 THRTPGTLR-PALTQLLHVPSEELVKFLQDILDTLFSILTQVEEDQEYYSDKSYGVLVFE 535
+ T AL Q + E+++F +LD LF ++ D+E S+K +VF+
Sbjct: 616 VNCVNLTSSLVALAQPIGDTEHEMIRFFSHLLDALF----EIWHDRE-TSEK----VVFD 666
Query: 536 CLLRVISLVADHK-YQHFQPVLHVYIDESFCDALAYESLITVMVWVIRTANSSEAAVKRL 594
++ V+ + + + Y + VY+ + A + L + +VI + S +
Sbjct: 667 VIVAVLRICEEPRHYPQAAKIFEVYLKRFSFTSAALKILKCLNHYVISDSEDSNEKARNA 726
Query: 595 LVCMKCXXXXXXXXXXXXXXXXALGDSAADDGFKALFDTLLEALVWLMRCGEHVLTCQGS 654
M D + +K +++LV LM + +T Q +
Sbjct: 727 FKVMGPLFKLVVVSKKCGIKFEEFDD--FEKTYKQYLREFMKSLVALMSEKKAKMTVQNT 784
Query: 655 ALKYFPHAVPHIIK---VYPDTELCAYII 680
ALK P + + + V P+ LC +I+
Sbjct: 785 ALKSIPTIIDLLNESDSVSPE-NLCGFIV 812
>AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical
protein W03F9.4 protein.
Length = 746
Score = 33.9 bits (74), Expect = 0.43
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 112 NFATTNVVFTDFGSDFMKNEKV 133
+F+ NVVFT++G DFMK KV
Sbjct: 515 DFSNANVVFTEYGKDFMKKAKV 536
>U53332-4|AAK31535.2| 821|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 35 protein.
Length = 821
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 462 KLTQKEEILGVLKWSTHRTPGTLRPALTQLLHVPSEELVKFLQDILDTLFSILTQVEEDQ 521
+L+Q E + V+ + +R G A + ++ EE V QD +D+ FS+++ + +DQ
Sbjct: 431 RLSQLPEYIKVMNYFDYR--GQCNIASYMIQNMLEEETVFRNQDDVDSAFSLISSLLKDQ 488
Query: 522 EYYSDKSY 529
E S S+
Sbjct: 489 EKQSSDSH 496
>DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar protein
sorting factor protein.
Length = 826
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 462 KLTQKEEILGVLKWSTHRTPGTLRPALTQLLHVPSEELVKFLQDILDTLFSILTQVEEDQ 521
+L+Q E + V+ + +R G A + ++ EE V QD +D+ FS+++ + +DQ
Sbjct: 436 RLSQLPEYIKVMNYFDYR--GQCNIASYMIQNMLEEETVFRNQDDVDSAFSLISSLLKDQ 493
Query: 522 EYYSDKSY 529
E S S+
Sbjct: 494 EKQSSDSH 501
>AF016676-9|AAG24107.1| 394|Caenorhabditis elegans Hypothetical
protein F41B5.10 protein.
Length = 394
Score = 29.5 bits (63), Expect = 9.3
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 35 YRLNALHDEANTRIDKNMETTPVTPNVTPAGVRTFTVCVRVHNFVCRV-ADVAELSLSLH 93
Y ++ HD+ +I K ET N TP + + V +H+ ++ D+ EL+ L
Sbjct: 274 YFMDCFHDDIYLQIVKEFETL----NPTPIELNFMLLQVCLHHAGKKLHGDMLELTDYLQ 329
Query: 94 DAAGNKLTEHLLIRWPTPNFA 114
+ N+L H L PN++
Sbjct: 330 EVISNQLHNHYLNVRKMPNYS 350
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,132,147
Number of Sequences: 27539
Number of extensions: 690536
Number of successful extensions: 1535
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1516
Number of HSP's gapped (non-prelim): 7
length of query: 767
length of database: 12,573,161
effective HSP length: 87
effective length of query: 680
effective length of database: 10,177,268
effective search space: 6920542240
effective search space used: 6920542240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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