GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002320-TA|BGIBMGA002320-PA|undefined
         (77 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051A500 Cluster: PREDICTED: similar to CG8861-PA ...    58   3e-08
UniRef50_Q9VHF9 Cluster: CG8861-PA; n=2; Sophophora|Rep: CG8861-...    48   5e-05
UniRef50_Q3E0J6 Cluster: Rhodanese-like; n=1; Chloroflexus auran...    31   5.9  

>UniRef50_UPI000051A500 Cluster: PREDICTED: similar to CG8861-PA
          isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar
          to CG8861-PA isoform 1 - Apis mellifera
          Length = 125

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 24/39 (61%), Positives = 31/39 (79%), Gaps = 1/39 (2%)

Query: 21 IRCWKCGQYSDGVGSITPCSNRSA-ARLDECPKDSKFCI 58
          IRC+KCGQY++GVGSITPC N +A   L ECP  +++CI
Sbjct: 26 IRCYKCGQYNEGVGSITPCINYTAHMHLKECPPSAEWCI 64


>UniRef50_Q9VHF9 Cluster: CG8861-PA; n=2; Sophophora|Rep: CG8861-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 180

 Score = 47.6 bits (108), Expect = 5e-05
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 5/51 (9%)

Query: 21  IRCWKCGQYSDGVGSITPCSNRSA----ARLDECPKDS-KFCIYRNANRST 66
           ++C  CGQY++GVGSITPC+N +       L EC K S KFC+   +  ST
Sbjct: 71  LKCHMCGQYNEGVGSITPCTNYTTDIAHLYLKECTKKSEKFCVKYVSELST 121


>UniRef50_Q3E0J6 Cluster: Rhodanese-like; n=1; Chloroflexus
          aurantiacus J-10-fl|Rep: Rhodanese-like - Chloroflexus
          aurantiacus J-10-fl
          Length = 120

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 44 AARLDECPKDSKF-CIYRNANRSTPATQLLR 73
          A+RL+E PKD    CI R+ NRS  A ++L+
Sbjct: 62 ASRLNELPKDQPIVCICRSGNRSQVACEMLQ 92


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.322    0.133    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,371,209
Number of Sequences: 1657284
Number of extensions: 1707346
Number of successful extensions: 3323
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3321
Number of HSP's gapped (non-prelim): 3
length of query: 77
length of database: 575,637,011
effective HSP length: 56
effective length of query: 21
effective length of database: 482,829,107
effective search space: 10139411247
effective search space used: 10139411247
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)