Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002319-TA|BGIBMGA002319-PA|undefined
(66 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 26 0.71
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 25 1.2
SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase Hat1|Schi... 24 2.2
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 24 2.9
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 24 2.9
SPAC24C9.02c |||cytochrome c1 heme lyase|Schizosaccharomyces pom... 24 2.9
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 23 3.8
SPBC16D10.01c ||SPBC418.03c|conserved fungal protein|Schizosacch... 23 5.0
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 23 6.6
SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces po... 23 6.6
SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase Vas1|Schizos... 23 6.6
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 22 8.7
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 22 8.7
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 25.8 bits (54), Expect = 0.71
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 9 IPEPSWVTELKDKIKKLI-TLHGYENAKDHIKQLVKECRVYYMYILSIYQDHVITGIL 65
+ + +W T L + IKK+I T+ ++ K L + C VY +L + I+ +L
Sbjct: 353 VNKKNWATVLSNGIKKVIKTITASSRHANYAKALPR-CSVYLQLLLGAIPEDQISELL 409
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 25.0 bits (52), Expect = 1.2
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 18 LKDKIKKLITLHGYENAKDHIKQLVKECRVYYMYILSIYQDHVI 61
L D + + I H + + D +L+ +C +YY +I S++Q ++
Sbjct: 760 LFDSLTRYIKSHKF--SVDGGLKLLSDCNLYYEFIHSLHQSSLL 801
>SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase
Hat1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 24.2 bits (50), Expect = 2.2
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 20 DKIKKLITLHG-YENAKDHIKQLVKE 44
DK +++ +H YEN D KQ+VK+
Sbjct: 333 DKSERIEKIHNAYENQFDEYKQIVKK 358
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 712 VDIPTPSWVTE 722
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 784 VDIPTPSWVTE 794
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 820 VDIPTPSWVTE 830
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 892 VDIPTPSWVTE 902
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 928 VDIPTPSWVTE 938
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 964 VDIPTPSWVTE 974
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 1000 VDIPTPSWVTE 1010
Score = 23.4 bits (48), Expect = 3.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ +P PSWVTE
Sbjct: 748 VDVPTPSWVTE 758
Score = 23.4 bits (48), Expect = 3.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ +P PSWVTE
Sbjct: 856 VDVPTPSWVTE 866
Score = 23.0 bits (47), Expect = 5.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ +P PSW+TE
Sbjct: 676 VDVPTPSWITE 686
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 647 VDIPTPSWVTE 657
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 683 VDIPTPSWVTE 693
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 719 VDIPTPSWVTE 729
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 7 IQIPEPSWVTE 17
+ IP PSWVTE
Sbjct: 755 VDIPTPSWVTE 765
>SPAC24C9.02c |||cytochrome c1 heme lyase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 23.8 bits (49), Expect = 2.9
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 24 KLITLHGYENAKDHIKQLVKECRVYYMYILSIYQDHVITG 63
+++ L GY D LV C Y++ Y + G
Sbjct: 143 RILNLLGYNKPFDRHDWLVNRCGRKVAYVIDFYNGPTVNG 182
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 23.4 bits (48), Expect = 3.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 19 KDKIKKLITLHGYENAKDHIKQLV 42
++K+K + + HG E HIK+ V
Sbjct: 148 REKLKDIFSPHGKEKELAHIKKTV 171
>SPBC16D10.01c ||SPBC418.03c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 23.0 bits (47), Expect = 5.0
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 34 AKDHIKQLVKECRVYYMYILSIYQ 57
+++ IK+L+ + Y++ L +YQ
Sbjct: 264 SEEEIKELLMNAKFYFISALGVYQ 287
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 22.6 bits (46), Expect = 6.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 29 HGYENAKDHIKQLVKE 44
H E KDH K L+KE
Sbjct: 473 HENEEVKDHAKTLLKE 488
>SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 674
Score = 22.6 bits (46), Expect = 6.6
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 20 DKIKKLITLHGYENAKDHIKQLVKECRVYYMYILSIYQDHVITGI 64
D + ++T HGYE +++ + RV I ++ +H++ I
Sbjct: 515 DLFQAVLTFHGYEAGLLMVERSRQTERVINKDIFALKMEHLLNEI 559
>SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase
Vas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 950
Score = 22.6 bits (46), Expect = 6.6
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 20 DKIKKLITLHGYENAKDHIKQLVKECRV 47
DKI+ + GYE A +IK +K C +
Sbjct: 905 DKIQHTTSSSGYEKAPSYIK--LKNCEL 930
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 22.2 bits (45), Expect = 8.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 29 HGYENAKDHIKQLVKECRVYYMYILS 54
H +NA+ + + VK R Y+ ILS
Sbjct: 1497 HVIKNARAKLTKAVKSLRSYHRLILS 1522
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 22.2 bits (45), Expect = 8.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 15 VTELKDKIKKLITLHGYENAKDHIKQLVK 43
V + D I TLH +NAK+ + L++
Sbjct: 852 VVPIADGIYASTTLHPIDNAKNRLVSLLR 880
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.139 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,535
Number of Sequences: 5004
Number of extensions: 10338
Number of successful extensions: 50
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 25
length of query: 66
length of database: 2,362,478
effective HSP length: 46
effective length of query: 20
effective length of database: 2,132,294
effective search space: 42645880
effective search space used: 42645880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
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