Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002319-TA|BGIBMGA002319-PA|undefined
(66 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 0.40
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 0.40
AF040655-11|AAB95040.1| 251|Caenorhabditis elegans Hypothetical... 27 1.6
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 27 2.1
AF036705-10|AAB95167.2| 612|Caenorhabditis elegans Hypothetical... 25 5.0
Z81136-2|CAB03459.1| 743|Caenorhabditis elegans Hypothetical pr... 25 6.6
U58753-6|AAC24440.1| 705|Caenorhabditis elegans Hypothetical pr... 25 6.6
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 25 6.6
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 25 6.6
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 25 6.6
Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical p... 25 8.7
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p... 25 8.7
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein. 25 8.7
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 29.1 bits (62), Expect = 0.40
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 6 PIQIPEPSWVTELKDKIKKLITLHGYENAK 35
P ++ W+T+L +++K+LI + G +N K
Sbjct: 4407 PREVTVMDWMTDLNERLKQLIRIGGADNLK 4436
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 29.1 bits (62), Expect = 0.40
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 6 PIQIPEPSWVTELKDKIKKLITLHGYENAK 35
P ++ W+T+L +++K+LI + G +N K
Sbjct: 4407 PREVTVMDWMTDLNERLKQLIRIGGADNLK 4436
>AF040655-11|AAB95040.1| 251|Caenorhabditis elegans Hypothetical
protein T24E12.2 protein.
Length = 251
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 1 MSELEPIQIPEPSWVTELKDKIKKLITLHGYENAKDHIKQLVKECRVY 48
+ E+ + I E + + E K + L N +DH+ QL +C+++
Sbjct: 49 LEEINAMNIIEINRLRESNTHANKALRLEN-SNLRDHVLQLTNDCQIF 95
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 2 SELEPIQIPEPSWVTELKDKIKKLITLHGYENAKDHIKQL 41
+ ++ I++ + S++TEL D + T +G N K+ I +L
Sbjct: 1504 ANMDMIRLLQKSYLTELFDASDRKTTTNGESNGKETIHEL 1543
>AF036705-10|AAB95167.2| 612|Caenorhabditis elegans Hypothetical
protein F37C4.1 protein.
Length = 612
Score = 25.4 bits (53), Expect = 5.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 23 KKLITLHGYENAKDHIKQLVKEC 45
K ++ H YE A+ QL+K+C
Sbjct: 533 KAIVIFHEYEMARKRHAQLIKDC 555
>Z81136-2|CAB03459.1| 743|Caenorhabditis elegans Hypothetical
protein W02B8.3 protein.
Length = 743
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 9 IPEPSWVTELKDKIKKLITLHGYENAKDHIKQ 40
I + S T+ DK+KKL ++ YE +K K+
Sbjct: 139 IEKKSRTTKKSDKLKKLRSMESYEASKSAEKK 170
>U58753-6|AAC24440.1| 705|Caenorhabditis elegans Hypothetical
protein W03B1.8 protein.
Length = 705
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 16 TELKDKIKKLITLHGYENAKDHIKQLVKEC 45
T+ D +I L YE A+ QLVK+C
Sbjct: 600 TDFADIDNTVIKLGDYEMARKRYDQLVKDC 629
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 25.0 bits (52), Expect = 6.6
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 4 LEPIQIPEPSWVTELKDKIKKLI-TLHGYENAKDHIKQLV 42
+E +++P W ++ K+K+ K++ TL E ++ H ++ V
Sbjct: 820 IEIVELPIGIWTSKYKEKLSKIVETLPVLEFSERHTEKRV 859
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 25.0 bits (52), Expect = 6.6
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 16 TELKDKIKKLITLHGYENAKDHIKQLVKECRVYYMYILS 54
+E++DK+K+ L + K ++ +C+VY+ +++
Sbjct: 427 SEIQDKVKEYFALLPSDQQKTLTEEFKGKCKVYFTPLMT 465
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a
protein.
Length = 1440
Score = 25.0 bits (52), Expect = 6.6
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 16 TELKDKIKKLITLHGYENAKDHIKQLVKECRVYYMYILS 54
+E++DK+K+ L + K ++ +C+VY+ +++
Sbjct: 427 SEIQDKVKEYFALLPSDQQKTLTEEFKGKCKVYFTPLMT 465
>Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 35 KDHIKQLVKECRVYYMYILSI 55
KDH+ QL K+C + + L I
Sbjct: 38 KDHLNQLRKKCEKFQTFTLEI 58
>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 35 KDHIKQLVKECRVYYMYILSI 55
KDH+ QL K+C + + L I
Sbjct: 38 KDHLNQLRKKCEKFQTFTLEI 58
>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 35 KDHIKQLVKECRVYYMYILSI 55
KDH+ QL K+C + + L I
Sbjct: 38 KDHLNQLRKKCEKFQTFTLEI 58
>Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 35 KDHIKQLVKECRVYYMYILSI 55
KDH+ QL K+C + + L I
Sbjct: 38 KDHLNQLRKKCEKFQTFTLEI 58
>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 35 KDHIKQLVKECRVYYMYILSI 55
KDH+ QL K+C + + L I
Sbjct: 38 KDHLNQLRKKCEKFQTFTLEI 58
>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
Length = 1009
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 35 KDHIKQLVKECRVYYMYILSI 55
KDH+ QL K+C + + L I
Sbjct: 38 KDHLNQLRKKCEKFQTFTLEI 58
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.139 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,721,576
Number of Sequences: 27539
Number of extensions: 54433
Number of successful extensions: 217
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 201
Number of HSP's gapped (non-prelim): 18
length of query: 66
length of database: 12,573,161
effective HSP length: 46
effective length of query: 20
effective length of database: 11,306,367
effective search space: 226127340
effective search space used: 226127340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)
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