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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002318-TA|BGIBMGA002318-PA|IPR001478|PDZ/DHR/GLGF,
IPR001940|Peptidase S1C, HrtA/DegP2/Q/S, IPR002731|ATPase,
BadF/BadG/BcrA/BcrD type, IPR001254|Peptidase S1 and S6,
chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
         (579 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12733| Best HMM Match : Trypsin (HMM E-Value=2e-11)                226   4e-59
SB_6422| Best HMM Match : Gemini_AC4_5 (HMM E-Value=6.7)               47   4e-05
SB_40709| Best HMM Match : Gemini_AC4_5 (HMM E-Value=6.7)              47   4e-05
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.068
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.16 
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.27 
SB_40161| Best HMM Match : CH (HMM E-Value=4.3e-30)                    34   0.36 
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)                33   0.48 
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.63 
SB_12952| Best HMM Match : Peptidase_M50 (HMM E-Value=8.9e-07)         33   0.83 
SB_24715| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.83 
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)                   32   1.5  
SB_48561| Best HMM Match : AAA (HMM E-Value=0)                         31   2.5  
SB_39164| Best HMM Match : RNB (HMM E-Value=0)                         31   2.5  
SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20)                   31   3.4  
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   3.4  
SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11)                   30   4.4  
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   5.9  
SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)                 30   5.9  
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)                   30   5.9  
SB_41330| Best HMM Match : Destabilase (HMM E-Value=5)                 29   7.8  
SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.8  
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)                    29   7.8  
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.8  
SB_33452| Best HMM Match : PDZ (HMM E-Value=1.2e-11)                   29   7.8  

>SB_12733| Best HMM Match : Trypsin (HMM E-Value=2e-11)
          Length = 376

 Score =  226 bits (552), Expect = 4e-59
 Identities = 135/279 (48%), Positives = 177/279 (63%), Gaps = 25/279 (8%)

Query: 266 EKYNFIADXXXXXXXXXXYIEIVDGRRIDAF--TGKKLKISNGSGFIIKEDGLILTNAHV 323
           +++NFIAD           IE+ D RR+  +   G++   S GSGFI+ EDGL+LTNAHV
Sbjct: 100 KRFNFIADAVETAAPAVVRIEVTD-RRMSGYYMRGQRGPSSLGSGFIVSEDGLVLTNAHV 158

Query: 324 VVNKPNAIVKVRLTDGSTHEALIEHYDLQSDLATLRIP-VKG----LPTMKLGTSADLKP 378
           + N  +  V V+L DG      +   D   DLA +++  + G     PT+KLG+S+ L+P
Sbjct: 159 LENATD--VTVKLKDGQEFRGELLDLDPVKDLAAIKLKAINGQQIKFPTIKLGSSSLLRP 216

Query: 379 GEWVVAIGSPLDLSNTVTAGVVSSTQRAGSELGLQDRNIVYIQTDAPITFGNSGGPLVNL 438
           GEWVVA+GSPL LSNTVT+G++S+  R G ELGL +R + YIQTDAPI  GNSGGPLVNL
Sbjct: 217 GEWVVAMGSPLMLSNTVTSGIISTVHRGGGELGLPNREMEYIQTDAPINVGNSGGPLVNL 276

Query: 439 DGEAIGIN--SMKVTYGISFAIPIDYVKEFL----AKHKTKSPQVSKR--------YLGI 484
           DGE IGIN  ++K   GISFAIPID VK+FL     +   KS  +S R        Y+GI
Sbjct: 277 DGEVIGINVITVKFAAGISFAIPIDAVKDFLKGIPERRGLKSGGISPRRLGSRQRWYIGI 336

Query: 485 TMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPA 523
           +ML+L+P IL EL+ R+     DI  G+ V +V  GSPA
Sbjct: 337 SMLTLSPQILEELQRRDSRF-EDINDGVFVAEVNFGSPA 374


>SB_6422| Best HMM Match : Gemini_AC4_5 (HMM E-Value=6.7)
          Length = 442

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 9/129 (6%)

Query: 423 DAPITFGNSGGPLVNLDGEAIGI--NSMKVTYGISFAIPIDYVKEFLAKHKTKSPQVSKR 480
           DA I  GNSGGP +  D + IGI   ++     I + IP+  ++ FL   K      ++ 
Sbjct: 2   DAAINSGNSGGPALQ-DDKVIGIAFETLDNAENIGYIIPVTIIQHFLEDIKR-----NQT 55

Query: 481 YLGITMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGK 540
           Y G   L +    +    MR+    T  Q G+L+ KV +   + +G L+ GD+++ I+G+
Sbjct: 56  YYGFCRLGIKWQPIESDHMRSYFKLTAEQTGVLITKV-LSLFSCSGKLKRGDVLIAIDGE 114

Query: 541 PVHNTTDIY 549
            + +   ++
Sbjct: 115 QIADNGTVH 123


>SB_40709| Best HMM Match : Gemini_AC4_5 (HMM E-Value=6.7)
          Length = 402

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 9/129 (6%)

Query: 423 DAPITFGNSGGPLVNLDGEAIGI--NSMKVTYGISFAIPIDYVKEFLAKHKTKSPQVSKR 480
           DA I  GNSGGP +  D + IGI   ++     I + IP+  ++ FL   K      ++ 
Sbjct: 2   DAAINSGNSGGPALQ-DDKVIGIAFETLDNAENIGYIIPVTIIQHFLEDIKR-----NQT 55

Query: 481 YLGITMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGK 540
           Y G   L +    +    MR+    T  Q G+L+ KV +   + +G L+ GD+++ I+G+
Sbjct: 56  YYGFCRLGIKWQPIESDHMRSYFKLTAEQTGVLITKV-LSLFSCSGKLKRGDVLIAIDGE 114

Query: 541 PVHNTTDIY 549
            + +   ++
Sbjct: 115 QIADNGTVH 123


>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2149

 Score = 36.3 bits (80), Expect = 0.068
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 512 ILVWKVIIGSPAFNGGLQPGDIVVKINGKPVH--NTTDIYNILESTTGSLKIDAVRGRQQ 569
           + V  V   SPAF  G++ GD+V+K+NG  V   N   +  ++E+    + +  + G Q 
Sbjct: 102 VFVHNVEPKSPAFTVGMRTGDLVLKVNGVSVRHANAEQVQQVVEACGPIVSVVLIAGAQS 161

Query: 570 I 570
           I
Sbjct: 162 I 162



 Score = 33.9 bits (74), Expect = 0.36
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 512 ILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGS 558
           + V  V  GSPA    L+PGD +++ING  V N T  + ++E   GS
Sbjct: 484 VCVRSVDKGSPAAQARLKPGDHILEINGLNVRNKTHAH-VVELLKGS 529



 Score = 33.5 bits (73), Expect = 0.48
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 520 GSPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGS 558
           GSPA    L+PGD +++ING  V N T  + ++E   GS
Sbjct: 324 GSPAAQARLKPGDHILEINGLNVRNKTHAH-VVELLKGS 361


>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2437

 Score = 35.1 bits (77), Expect = 0.16
 Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 5/61 (8%)

Query: 506  TDIQHGIL--VWKVIIGSPA-FNGGLQPGDIVVKINGKPVHNTT--DIYNILESTTGSLK 560
            +D +HG L  + K+  G PA  +G LQ GDI+ ++NGK + N +  D  NI+   + +++
Sbjct: 1382 SDPEHGGLLRIKKMFPGQPATLSGKLQVGDIIQEVNGKSLANASHQDAINIIRQESPAVQ 1441

Query: 561  I 561
            +
Sbjct: 1442 L 1442



 Score = 33.9 bits (74), Expect = 0.36
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 511  GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHNTTDIYNILESTTGSLKIDAVRGRQQ 569
            GI V  V  GS AF  G L+ GD ++ +NG  +   +  Y +++  T    ++ V  + Q
Sbjct: 995  GIFVKSVTEGSVAFKDGRLKAGDRILAVNGTSLEQVSHEYAVMQLKTAPTLVELVVLQSQ 1054

Query: 570  INLT 573
             N T
Sbjct: 1055 QNTT 1058


>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1393

 Score = 34.3 bits (75), Expect = 0.27
 Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 4/51 (7%)

Query: 520 GSPAFNGGLQPGDIVVKINGKPVHNTT--DIYNILES--TTGSLKIDAVRG 566
           G+ A +G L+ GD ++K+NG+ V N T  ++ ++ +S  T   +++D +RG
Sbjct: 477 GAAAKDGKLRTGDALIKVNGRSVVNKTHQEVVSMFQSMPTNEPIELDMIRG 527


>SB_40161| Best HMM Match : CH (HMM E-Value=4.3e-30)
          Length = 144

 Score = 33.9 bits (74), Expect = 0.36
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 197 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNLNGVENCGATIGFIGYFSLREKVTA 254
           +D  AFC + H++RPD +N D+    + + N  L   E     +G     S  E VT+
Sbjct: 30  KDGLAFCAIIHRFRPDLLNFDSLKPGDTETNCKL-AFETAEEQLGIPPQISASEMVTS 86


>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1357

 Score = 33.5 bits (73), Expect = 0.48
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)

Query: 500 RNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTT--DIYNILESTTG 557
           + P MP+     + V KV    P+  GGL+PGD +V INGK +   +  +  N++  T G
Sbjct: 531 KEPGMPSP---ALFVRKVF-APPSQVGGLEPGDEIVGINGKSIKGKSHEEAMNLIRHTQG 586


>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1913

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 382  VVAIGSPLDLSNTVTAGVVSSTQRAGSELGLQDRNIVYIQTDAPIT 427
            ++ I   +D+S  +TA  +SS  R GS   ++    V + TD PIT
Sbjct: 1215 IINIKHEIDISQDITANQLSSKNRTGSSQAIEAYLEVDVTTDVPIT 1260


>SB_12952| Best HMM Match : Peptidase_M50 (HMM E-Value=8.9e-07)
          Length = 413

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 482 LGITMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGKP 541
           LG+ +L   P +L+ L M +         G +V KV   SP F G +  GD +  + G P
Sbjct: 202 LGLLLLWSLPYLLVPLYMAD--------QGAVVTKVSRNSPVF-GSINRGDTIYSVYGCP 252

Query: 542 VHNTTDIYNILESTTGS 558
           V+N  D    +  T  S
Sbjct: 253 VNNKNDWIQCVSRTLNS 269


>SB_24715| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 324

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 505 PTDIQHGIL-VWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGS 558
           P D +H ++ V  V +G  A   GL+PGD++ K+N +      D  NI  S   +
Sbjct: 92  PGDGRHAMISVAHVEVGLFAHGFGLRPGDVIHKVNDRECSGVQDTKNIFWSVNST 146


>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
          Length = 619

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 501 NPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTT 546
           NP  P D +  I V KV    PA  G L+PGD ++++NG  + NTT
Sbjct: 551 NPFDPAD-ETSIYVTKVQPEGPAAFG-LKPGDKILEVNGINLRNTT 594


>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
          Length = 2021

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 401 SSTQRAGSELGLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGIN 446
           S    AGS+LG+   N++   + + + +  SG  + NLD  A G+N
Sbjct: 125 SGISTAGSDLGVGGPNVIAPVSTSSLEYTESGTTVTNLDQCAYGVN 170


>SB_39164| Best HMM Match : RNB (HMM E-Value=0)
          Length = 597

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 197 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNL 230
           RD  A C + H++RPD +N +   K +   N  L
Sbjct: 564 RDGMALCAIIHRFRPDLINFEQLCKDDHAKNNGL 597


>SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20)
          Length = 285

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 525 NGGLQPGDIVVKINGKPVHNT--TDIYNILESTTGSLKIDAVRGRQ 568
           +GGL+PGDI++ +N + +     +    IL+S +G++++   + R+
Sbjct: 190 HGGLRPGDILLAVNDRSLVGLEHSQAVRILKSVSGTVRLTVKKSRE 235


>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1284

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 10/139 (7%)

Query: 443 IGINSMKVTYGISFAIPIDYVKEFLAKHKTKSPQVSKRYLGITML--SLTPSILMEL-KM 499
           +G++ +   +   F   +  +KEF A+   + P+ + R+     +  +L P++  EL +M
Sbjct: 412 LGLHELTARFKGVFGTGLGKIKEFQARINVQ-PEATPRFHKARPVPYALKPAVEAELDRM 470

Query: 500 RNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGK------PVHNTTDIYNILE 553
               + T + H      +++   A  G    GD  V +N        P+ N  D+ + L 
Sbjct: 471 EKEGIVTKVSHSEWAAPLVVVPKADGGVRLCGDYKVTVNPVLDVDQYPLPNPQDLLSALA 530

Query: 554 STTGSLKIDAVRGRQQINL 572
             T   K+D     QQ+ L
Sbjct: 531 GGTKFSKLDLKHAYQQLPL 549


>SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11)
          Length = 881

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 517 VIIGSPAFNGGLQPGDIVVKINGKPV 542
           ++  SPA   GL+PGD ++ +NG  V
Sbjct: 304 ILASSPAHKAGLKPGDQILYVNGSSV 329


>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2749

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 512 ILVWKVIIGSPAF-NGGLQPGDIVVKINGKPVHNTT 546
           I V +++ GS    NG LQPGD ++ +NG+ + N T
Sbjct: 219 ITVRRILPGSVCDRNGKLQPGDRLISMNGESLTNVT 254


>SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)
          Length = 465

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 517 VIIGSPAFN-GGLQPGDIVVKINGKPVHNT--TDIYNILEST-TGS 558
           ++ GS A     LQPGDI++++NGK +  +   D  ++L    TGS
Sbjct: 36  IVKGSAAEGVSNLQPGDIILEVNGKSIEESHFKDAVDVLSGVETGS 81


>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
          Length = 386

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 493 ILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGKPV 542
           + +E  + NP +  D   GI V  V   SPA+ G L PGD ++ +NG+ V
Sbjct: 310 VRLEGGLDNPSLHGD--PGIFVQAVKKDSPAY-GKLYPGDRILSVNGERV 356


>SB_41330| Best HMM Match : Destabilase (HMM E-Value=5)
          Length = 499

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 10/126 (7%)

Query: 456 FAIPIDYVKEFLAKHKTKSPQVSKRYLGITML--SLTPSILMEL-KMRNPEMPTDIQHGI 512
           F   +  +KEF A+   + P+ + R+     +  +L P++  EL +M    + T + H  
Sbjct: 305 FCTGLGKIKEFQARINVQ-PEATPRFHKARPVPYALKPAVEAELDRMEKEGIVTKVSHSE 363

Query: 513 LVWKVIIGSPAFNGGLQPGDIVVKINGK------PVHNTTDIYNILESTTGSLKIDAVRG 566
               +++   A  G    GD  V +N        P+ N  D+ + L  +T   K+D    
Sbjct: 364 WAAPLVVVPKADGGVRLCGDYKVTVNPVLDVDQYPLPNPQDLLSALAGSTKFSKLDLKHA 423

Query: 567 RQQINL 572
            QQ+ L
Sbjct: 424 YQQLPL 429


>SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 530

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 8/60 (13%)

Query: 522 PAFNGGLQPGDIVVKINGKPVHNTTD--IYNILESTTGSLK-----IDAVRGRQQINLTI 574
           PA+  G++PGDI+V +  + V       + ++L+    S++     +DA+R R  +N  I
Sbjct: 430 PAYMAGMRPGDIIVSVENRDVEEEDHRVLVSLLQEAPVSIRLVVVFVDAIR-RMHLNTRI 488


>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
          Length = 458

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)

Query: 509 QHG--ILVWKVIIGSPAFN-GGLQPGDIVVKINGKPVHNT--TDIYNILESTTGSLKIDA 563
           +HG  IL+ ++  G PA   GGL  GD ++ +NG  + +    D   IL S  G + ++ 
Sbjct: 266 EHGVPILISEIHDGMPAARCGGLYVGDAILAVNGIDLQDAKHNDAVKILSSIHGEITMEV 325

Query: 564 V 564
           +
Sbjct: 326 L 326


>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 751

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 512 ILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTT 546
           + V +V    PA   GL  GD +V +NG  V N T
Sbjct: 187 VFVRQVAPNGPADKAGLSSGDQIVSVNGNQVLNRT 221


>SB_33452| Best HMM Match : PDZ (HMM E-Value=1.2e-11)
          Length = 278

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)

Query: 511 GILVWKVIIGSPA--FNGGLQPGDIVVKINGK--PVHNTTDIYNILEST 555
           GI + +++  S A    G L PGD V++ING+      T +++NI+ S+
Sbjct: 214 GIFISRIMDSSSAKFLAGLLNPGDEVLEINGQSTKTKTTAEVHNIMASS 262


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.136    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,744,053
Number of Sequences: 59808
Number of extensions: 696408
Number of successful extensions: 1434
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1405
Number of HSP's gapped (non-prelim): 37
length of query: 579
length of database: 16,821,457
effective HSP length: 86
effective length of query: 493
effective length of database: 11,677,969
effective search space: 5757238717
effective search space used: 5757238717
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)

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