Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002318-TA|BGIBMGA002318-PA|IPR001478|PDZ/DHR/GLGF,
IPR001940|Peptidase S1C, HrtA/DegP2/Q/S, IPR002731|ATPase,
BadF/BadG/BcrA/BcrD type, IPR001254|Peptidase S1 and S6,
chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
(579 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 66 5e-11
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 42 0.001
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 42 0.001
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 35 0.14
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 35 0.14
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 35 0.14
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 35 0.14
AF099920-8|AAK29848.1| 402|Caenorhabditis elegans Hypothetical ... 34 0.32
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 33 0.42
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 33 0.42
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 33 0.42
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 31 2.2
AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical ... 31 2.2
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 31 2.2
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 31 2.2
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 31 2.2
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 31 2.2
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 30 3.9
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 30 3.9
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 30 3.9
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 30 3.9
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 30 5.2
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 5.2
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 30 5.2
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 30 5.2
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 30 5.2
U00035-2|AAA50644.2| 413|Caenorhabditis elegans Hypothetical pr... 30 5.2
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 30 5.2
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 30 5.2
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 29 6.8
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 66.5 bits (155), Expect = 5e-11
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 1 MVSSSGTGSNALLRTSDGEQHNCXXXXXXXXXXXXAYWIAHKAVKSVIDDVDGLRISPYP 60
+V +GTGS+ L+ DG A+WIA A++ + D DG +
Sbjct: 313 IVLIAGTGSSCRLKIRDGSVKGAGGWGHQIGDGGSAFWIARTAIQMLFDAEDGFE-ENFN 371
Query: 61 THNVWEVIREHFDADTRADLLPHAYKNFNKSQFAGLTVKLS--------ALAYK--GDEL 110
T + +++ +H++ + +L + Y F K + A TV L+ A A++ GD L
Sbjct: 372 TDVIKQLLFKHYNITDKTRMLDYLYSKFEKHKIADFTVSLAERTDDAAVAEAFRRAGDVL 431
Query: 111 SRHIFXXXXXXXXXXXXXXXXXXTAKRLRVVCVGSVWNSWDVLKPGMLNELNAKKVKCEL 170
+H+ K L +V +G V+ SWD L+ G + L+ ++ ++
Sbjct: 432 GKHV---------RTVAKYLTNEDRKVLSIVQIGGVFQSWDALQQGFVASLSGSGIE-KI 481
Query: 171 ELVRLKVSSAMGAAWLAANKIN 192
+ S A+GAA LAA + N
Sbjct: 482 VMYEPSDSPAVGAAVLAAKERN 503
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 508 IQHGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTT 546
I+H +V V+ GSPAF+ LQ D++ +NG PVHN T
Sbjct: 1199 IEH--IVTAVVEGSPAFHANLQAEDMITHVNGHPVHNLT 1235
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 508 IQHGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTT 546
I+H +V V+ GSPAF+ LQ D++ +NG PVHN T
Sbjct: 1199 IEH--IVTAVVEGSPAFHANLQAEDMITHVNGHPVHNLT 1235
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 35.1 bits (77), Expect = 0.14
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 521 SPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGSLKIDAVRGRQQIN 571
S A +PGD++V IN P+ + L+STTG L + R I+
Sbjct: 370 SLADKAAFKPGDVLVAINNVPIRSERQATRFLQSTTGDLTVLVERSLDDID 420
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
protein C53B4.4c protein.
Length = 1304
Score = 35.1 bits (77), Expect = 0.14
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 521 SPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGSLKIDAVRGRQQIN 571
S A +PGD++V IN P+ + L+STTG L + R I+
Sbjct: 370 SLADKAAFKPGDVLVAINNVPIRSERQATRFLQSTTGDLTVLVERSLDDID 420
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical
protein C53B4.4b protein.
Length = 1586
Score = 35.1 bits (77), Expect = 0.14
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 521 SPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGSLKIDAVRGRQQIN 571
S A +PGD++V IN P+ + L+STTG L + R I+
Sbjct: 541 SLADKAAFKPGDVLVAINNVPIRSERQATRFLQSTTGDLTVLVERSLDDID 591
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical
protein C53B4.4a protein.
Length = 1584
Score = 35.1 bits (77), Expect = 0.14
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 521 SPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGSLKIDAVRGRQQIN 571
S A +PGD++V IN P+ + L+STTG L + R I+
Sbjct: 541 SLADKAAFKPGDVLVAINNVPIRSERQATRFLQSTTGDLTVLVERSLDDID 591
>AF099920-8|AAK29848.1| 402|Caenorhabditis elegans Hypothetical
protein H06H21.9 protein.
Length = 402
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 509 QHGILVWKVIIGSPAFNGGLQPGDIVVKINGKPV-HNTTDIYNILESTTGSLKIDA 563
+HG LV +V SP F G + PGDI++++NG V + + ++ TTG + +
Sbjct: 78 RHG-LVTRVHYASP-FKGAILPGDIILQVNGTTVSFDEKQLTEHVDETTGGASLQS 131
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 512 ILVWKVIIGSPAFNGGLQPGDIVVKINGK 540
++V VI+GSPA GL GD ++ ING+
Sbjct: 394 VIVESVIVGSPADKAGLLVGDTILSINGE 422
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 512 ILVWKVIIGSPAFNGGLQPGDIVVKINGK 540
++V VI+GSPA GL GD ++ ING+
Sbjct: 349 VIVESVIVGSPADKAGLLVGDTILSINGE 377
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 512 ILVWKVIIGSPAFNGGLQPGDIVVKINGK 540
++V VI+GSPA GL GD ++ ING+
Sbjct: 444 VIVESVIVGSPADKAGLLVGDTILSINGE 472
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 507 DIQHGILVWKVIIGSP-AFNGGLQPGDIVVKING 539
D Q GI V KV+ G+P A +G L+ GD ++ +NG
Sbjct: 994 DRQMGIYVKKVVEGTPAAHDGRLETGDQLLSVNG 1027
>AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical
protein W03F11.6b protein.
Length = 678
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 507 DIQHGILVWKVIIGSP-AFNGGLQPGDIVVKING 539
D Q GI V KV+ G+P A +G L+ GD ++ +NG
Sbjct: 12 DRQMGIYVKKVVEGTPAAHDGRLETGDQLLSVNG 45
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 507 DIQHGILVWKVIIGSP-AFNGGLQPGDIVVKING 539
D Q GI V KV+ G+P A +G L+ GD ++ +NG
Sbjct: 992 DRQMGIYVKKVVEGTPAAHDGRLETGDQLLSVNG 1025
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 507 DIQHGILVWKVIIGSP-AFNGGLQPGDIVVKING 539
D Q GI V KV+ G+P A +G L+ GD ++ +NG
Sbjct: 992 DRQMGIYVKKVVEGTPAAHDGRLETGDQLLSVNG 1025
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 507 DIQHGILVWKVIIGSP-AFNGGLQPGDIVVKING 539
D Q GI V KV+ G+P A +G L+ GD ++ +NG
Sbjct: 992 DRQMGIYVKKVVEGTPAAHDGRLETGDQLLSVNG 1025
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 507 DIQHGILVWKVIIGSP-AFNGGLQPGDIVVKING 539
D Q GI V KV+ G+P A +G L+ GD ++ +NG
Sbjct: 992 DRQMGIYVKKVVEGTPAAHDGRLETGDQLLSVNG 1025
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 311 IKEDGLILTNAHVVVNKPNAIVKVRLTDGSTHEALIEHYDLQSDLATLRIPVKGLPTMKL 370
+ EDG I T + K NAIV ++ + EA I + S + P + T ++
Sbjct: 516 VTEDGPITTEFPEYIKKRNAIVGIKTLTPAQLEAAINAKPIPSSASEASAPSSNVETAEV 575
Query: 371 GTSADLKP 378
SA P
Sbjct: 576 AASAAAAP 583
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 484 ITMLSLTPSILMELKMRNPE----MPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKING 539
+T++S P ++E+++R P+ + +Q+G++ ++ G A GG++ G +++ING
Sbjct: 854 MTVVSTPP--VVEVRIRRPDTKYQLGFSVQNGVIC-SLLRGGIAERGGIRVGHRIIEING 910
Query: 540 KPVHNTTD--IYNILESTTGSL 559
V I N+L + G +
Sbjct: 911 TSVVAVAHDRIVNMLATAVGEI 932
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 484 ITMLSLTPSILMELKMRNPE----MPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKING 539
+T++S P ++E+++R P+ + +Q+G++ ++ G A GG++ G +++ING
Sbjct: 882 MTVVSTPP--VVEVRIRRPDTKYQLGFSVQNGVIC-SLLRGGIAERGGIRVGHRIIEING 938
Query: 540 KPVHNTTD--IYNILESTTGSL 559
V I N+L + G +
Sbjct: 939 TSVVAVAHDRIVNMLATAVGEI 960
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 30.3 bits (65), Expect = 3.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 525 NGGLQPGDIVVKINGKPVHNTTDIYNI 551
N L+PGD++ +++GK V+ DI N+
Sbjct: 166 NYDLKPGDVITQVDGKDVYFRADIENL 192
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 484 ITMLSLTPSILMELKMRNPE----MPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKING 539
+T++S P ++E+++R P+ + +Q+G++ ++ G A GG++ G +++ING
Sbjct: 854 MTVVSTPP--VVEVRIRRPDTKYQLGFSVQNGVIC-SLLRGGIAERGGIRVGHRIIEING 910
Query: 540 KPVHNTTD--IYNILESTTGSL 559
V I N+L + G +
Sbjct: 911 TSVVAVAHDRIVNMLATAVGEI 932
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 201 AFCQVFHKYRPDAVNGDAKVKHNGQVNGNLNGVENCGATIGFIG 244
A C V H YRPD + + + ++G ++ ++ ++ IG
Sbjct: 365 ALCAVLHSYRPDLIGDYETLDISNNMSGRISNIQRALDSLTLIG 408
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 201 AFCQVFHKYRPDAVNGDAKVKHNGQVNGNLNGVENCGATIGFIG 244
A C V H YRPD + + + ++G ++ ++ ++ IG
Sbjct: 365 ALCAVLHSYRPDLIGDYETLDISNNMSGRISNIQRALDSLTLIG 408
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 29.9 bits (64), Expect = 5.2
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 512 ILVWKVIIGSPAF-NGGLQPGDIVVKINGK 540
I V V+ G PA NG L+ GDI+V++NG+
Sbjct: 489 IQVKSVLSGGPAAANGVLRSGDILVRVNGR 518
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 511 GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHN--TTDIYNILESTTGSLKIDAVRGR 567
G+ V +++ G A + G L GD ++++NGK V D+ +L++ TG K+ GR
Sbjct: 2085 GVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITG--KVHLKLGR 2142
Query: 568 QQINLT 573
+I T
Sbjct: 2143 WKITET 2148
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 511 GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHN--TTDIYNILESTTGSLKIDAVRGR 567
G+ V +++ G A + G L GD ++++NGK V D+ +L++ TG K+ GR
Sbjct: 1876 GVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITG--KVHLKLGR 1933
Query: 568 QQINLT 573
+I T
Sbjct: 1934 WKITET 1939
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 511 GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHN--TTDIYNILESTTGSLKIDAVRGR 567
G+ V +++ G A + G L GD ++++NGK V D+ +L++ TG K+ GR
Sbjct: 2183 GVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITG--KVHLKLGR 2240
Query: 568 QQINLT 573
+I T
Sbjct: 2241 WKITET 2246
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 511 GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHN--TTDIYNILESTTGSLKIDAVRGR 567
G+ V +++ G A + G L GD ++++NGK V D+ +L++ TG K+ GR
Sbjct: 2085 GVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITG--KVHLKLGR 2142
Query: 568 QQINLT 573
+I T
Sbjct: 2143 WKITET 2148
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 511 GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHN--TTDIYNILESTTGSLKIDAVRGR 567
G+ V +++ G A + G L GD ++++NGK V D+ +L++ TG K+ GR
Sbjct: 1876 GVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITG--KVHLKLGR 1933
Query: 568 QQINLT 573
+I T
Sbjct: 1934 WKITET 1939
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 511 GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHN--TTDIYNILESTTGSLKIDAVRGR 567
G+ V +++ G A + G L GD ++++NGK V D+ +L++ TG K+ GR
Sbjct: 2183 GVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITG--KVHLKLGR 2240
Query: 568 QQINLT 573
+I T
Sbjct: 2241 WKITET 2246
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 511 GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHN--TTDIYNILESTTGSLKIDAVRGR 567
G+ V +++ G A + G L GD ++++NGK V D+ +L++ TG K+ GR
Sbjct: 1894 GVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITG--KVHLKLGR 1951
Query: 568 QQINLT 573
+I T
Sbjct: 1952 WKITET 1957
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 29.9 bits (64), Expect = 5.2
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 511 GILVWKVIIGSPAFN-GGLQPGDIVVKINGKPVHNTT--DIYNILESTTGSLKIDAVRGR 567
G + +V GS A G L+PGD VV+ NG+ + N T +Y+ + ++ ++ + R
Sbjct: 674 GAFITQVKPGSVADTIGRLRPGDEVVEWNGQSLQNATYEQVYDSIAASRYDTSVELIVSR 733
Query: 568 QQI 570
I
Sbjct: 734 SAI 736
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 29.9 bits (64), Expect = 5.2
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 511 GILVWKVIIGSPAFN-GGLQPGDIVVKINGKPVHNTT--DIYNILESTTGSLKIDAVRGR 567
G + +V GS A G L+PGD VV+ NG+ + N T +Y+ + ++ ++ + R
Sbjct: 674 GAFITQVKPGSVADTIGRLRPGDEVVEWNGQSLQNATYEQVYDSIAASRYDTSVELIVSR 733
Query: 568 QQI 570
I
Sbjct: 734 SAI 736
>U00035-2|AAA50644.2| 413|Caenorhabditis elegans Hypothetical
protein R01H2.2 protein.
Length = 413
Score = 29.9 bits (64), Expect = 5.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 422 TDAPITFGNSGGPLVNLDGEAIGINS 447
+D P+ G+ GGPLV DG IG S
Sbjct: 243 SDRPLAKGDRGGPLVTDDGVLIGFGS 268
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 511 GILVWKVIIGSPAFNGG-LQPGDIVVKINGKPVHN--TTDIYNILESTTGSLKIDAVRGR 567
G+ V +++ G A + G L GD ++++NGK V D+ +L++ TG K+ GR
Sbjct: 1854 GVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAMLKTITG--KVHLKLGR 1911
Query: 568 QQINLT 573
+I T
Sbjct: 1912 WKITET 1917
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 29.9 bits (64), Expect = 5.2
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 511 GILVWKVIIGSPAFN-GGLQPGDIVVKINGKPVHNTT--DIYNILESTTGSLKIDAVRGR 567
G + +V GS A G L+PGD VV+ NG+ + N T +Y+ + ++ ++ + R
Sbjct: 674 GAFITQVKPGSVADTIGRLRPGDEVVEWNGQSLQNATYEQVYDSIAASRYDTSVELIVSR 733
Query: 568 QQI 570
I
Sbjct: 734 SAI 736
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 197 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNLN 231
+D AFC + H++RPD + D H G NLN
Sbjct: 180 KDGLAFCALIHRHRPDLL--DYSQLHKGDPIHNLN 212
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 197 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNLN 231
+D AFC + H++RPD + D H G NLN
Sbjct: 180 KDGLAFCALIHRHRPDLL--DYSQLHKGDPIHNLN 212
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.136 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,110,450
Number of Sequences: 27539
Number of extensions: 527364
Number of successful extensions: 1152
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1127
Number of HSP's gapped (non-prelim): 66
length of query: 579
length of database: 12,573,161
effective HSP length: 85
effective length of query: 494
effective length of database: 10,232,346
effective search space: 5054778924
effective search space used: 5054778924
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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