Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002317-TA|BGIBMGA002317-PA|IPR002731|ATPase,
BadF/BadG/BcrA/BcrD type
(144 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC56F8.04c |coq2|ppt1|para-hydroxybenzoate--polyprenyltransfer... 28 0.49
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 27 1.1
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 1.1
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 27 1.5
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 2.0
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 25 6.0
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 25 6.0
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 24 7.9
SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|... 24 7.9
SPBC17A3.08 |||TatD|Schizosaccharomyces pombe|chr 2|||Manual 24 7.9
>SPAC56F8.04c
|coq2|ppt1|para-hydroxybenzoate--
polyprenyltransferaseCoq2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 358
Score = 28.3 bits (60), Expect = 0.49
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 45 GRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPKD 82
G G G +TLG+ G A R+ SM++ K D PKD
Sbjct: 291 GIMNGQGPVFYTLGVAGAAYRLSSMIY--KVDLDDPKD 326
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 27.1 bits (57), Expect = 1.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 25 VLRGATHSNLVICDEAGRVVGRAKGLG 51
+LR AT +L+I DE GR G G
Sbjct: 787 ILRAATPRSLIIIDELGRGTSTTDGFG 813
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.1 bits (57), Expect = 1.1
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 64 NRIISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAAS 123
N ++S+LH KED+G+P D L S ++ + LV +L P A
Sbjct: 275 NDVVSVLHN-KEDSGLPCDLLLLSGSCVVNEAMLSGESTPLVKESIELRPEEAVIDVDEL 333
Query: 124 DTAGSLFTG 132
D LF G
Sbjct: 334 DKNAVLFGG 342
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 1.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 61 GCANRIISMLHEAKEDAGIPKDQALDSLGLTLSGC 95
G ++ + H AK +G+ D+ L+ L + SGC
Sbjct: 133 GSSSTFSIIQHAAKFASGVESDKVLEHLSMAKSGC 167
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 26.2 bits (55), Expect = 2.0
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 61 GCANRIISMLHE--AKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKA 118
G ++ IIS L E + E +P D + L L + +SS + +A +K L +C ++
Sbjct: 661 GVSSAIISALGELASVEGEDMPVDVRGSFMKLILVNLQDQSSTLKRLASLKCLRKLCGRS 720
Query: 119 VY 120
Y
Sbjct: 721 GY 722
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 24.6 bits (51), Expect = 6.0
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 67 ISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTA 126
I++ ++K + K++ + LS C +++ A RV + Y+A D++
Sbjct: 64 INLADQSKAEEFAFKNKLSKESAIQLSSCIRKTLLAPSSTRVPSKNSSYETLTYSAKDSS 123
Query: 127 GSLFTGAPDG 136
+FT G
Sbjct: 124 DDVFTETNSG 133
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 24.6 bits (51), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 11 LNNKPTSRIRWEILVLRGATHSNLVI 36
LNNKP + RW L GA S + +
Sbjct: 368 LNNKPPASCRWTACGLAGAIASFITL 393
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 24.2 bits (50), Expect = 7.9
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 83 QALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVY-AASDTAGSL 129
+ALD L L L+ C Q+ + +VA ++ K +ASDT L
Sbjct: 2180 EALDGLLLPLNKCFQKVARDHIVACMQSAIQASGKVTLPSASDTVSKL 2227
>SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 700
Score = 24.2 bits (50), Expect = 7.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 53 NHWTLGIDGCANRIISMLHEAK-EDAGIPKDQALDSLGLTLSGCE 96
N W + +G RII + EAK ++A + L+ G GCE
Sbjct: 13 NQWAMDFEGNRLRIIDSIKEAKRQNASLRVGPELEVTGY---GCE 54
>SPBC17A3.08 |||TatD|Schizosaccharomyces pombe|chr 2|||Manual
Length = 312
Score = 24.2 bits (50), Expect = 7.9
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 25 VLRGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCAN 64
V RG H L D+ ++ RAK +G + D N
Sbjct: 25 VFRGIYHEKLKHPDDFDSIISRAKAVGVEKMMITGDNVEN 64
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,735
Number of Sequences: 5004
Number of extensions: 20828
Number of successful extensions: 44
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 10
length of query: 144
length of database: 2,362,478
effective HSP length: 67
effective length of query: 77
effective length of database: 2,027,210
effective search space: 156095170
effective search space used: 156095170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)
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