Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002317-TA|BGIBMGA002317-PA|IPR002731|ATPase,
BadF/BadG/BcrA/BcrD type
(144 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1268 + 27458823-27460046 31 0.28
01_01_0560 + 4117203-4117458,4119359-4119609,4119691-4119860,412... 30 0.84
03_02_0019 - 5031667-5032614 29 1.5
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 29 1.9
12_02_0596 + 20888675-20888715,20889940-20890187,20890218-20890621 28 2.6
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 28 2.6
07_03_1403 + 26322172-26322257,26322279-26322448,26322544-263238... 28 3.4
03_01_0603 + 4445977-4446882 27 4.5
11_06_0702 + 26432798-26432890,26434021-26434416 27 5.9
02_02_0211 + 7898434-7898574,7898759-7899349,7899575-7899821,790... 27 5.9
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 27 7.9
07_03_0088 + 13270463-13270745,13271113-13271584,13271680-13272484 27 7.9
01_04_0011 + 15067536-15068236,15068283-15068898 27 7.9
01_01_0822 - 6401993-6402133,6402542-6402708,6402865-6402966,640... 27 7.9
>12_02_1268 + 27458823-27460046
Length = 407
Score = 31.5 bits (68), Expect = 0.28
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 47 AKGLGTNHWTLGIDGCANRIISMLHEAKED--AGIPKDQALDSLGLTLSGCEQESSNAEL 104
A+ L T +D C R++ LHEAKE AG D S S +S +
Sbjct: 330 AENLMPRSKTKDVDACLERLVKALHEAKETKAAGGNDDDDESSSSSDDSDSSSDSEEQDK 389
Query: 105 VARVKDLDPMCAKAVY 120
+A V LD A+ Y
Sbjct: 390 LAVVTKLDFSLAQPNY 405
>01_01_0560 +
4117203-4117458,4119359-4119609,4119691-4119860,
4120188-4120385,4120922-4121081
Length = 344
Score = 29.9 bits (64), Expect = 0.84
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 16 TSRIRWEILVLRGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKE 75
T+ I+ +I L A V+C+ +K TNH T +D NR++S E KE
Sbjct: 104 TAVIKKDITALNSAVVDLQVLCNSQNESGNLSKDT-TNHSTTVVDNLKNRLMSATKEFKE 162
>03_02_0019 - 5031667-5032614
Length = 315
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 79 IPKDQALDSLGLTLSGCEQ--ESSNAELVARVKDLDPMCAKAVY 120
+P+DQ D L L+ + ++ A+LVA +D DP CAK V+
Sbjct: 104 LPQDQLRDLLAGALAAHPEAGRAARADLVA-ARDRDPACAKMVH 146
>01_06_0192 + 27347369-27348826,27349124-27349264,27349350-27351081,
27353739-27354606,27354784-27355957
Length = 1790
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 43 VVGRAKGLGTNHWTLGID-GCANRIISMLHEAKEDAGIPKDQALDSLGLTLS 93
+VG + G H D GC R + E+ EDAG KD++ G LS
Sbjct: 1696 IVGSEENSGEGHCVCSSDNGCVPRECTCHLESNEDAGTIKDESYYLSGQPLS 1747
>12_02_0596 + 20888675-20888715,20889940-20890187,20890218-20890621
Length = 230
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 62 CANRIISMLHEAKEDAGIPKDQALDSLGLTLS 93
C+N I+ L E K+D G P +L LG ++S
Sbjct: 75 CSNVILDKLPEKKKDPGCPTITSLCDLGASIS 106
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 68 SMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPM 114
S + E K++ G K+ D L L L + + SN+EL+ VKDLD M
Sbjct: 421 SQIEELKQELGHEKNLNGD-LHLQLQ--KMQESNSELLLAVKDLDEM 464
>07_03_1403 +
26322172-26322257,26322279-26322448,26322544-26323814,
26323962-26324006
Length = 523
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 86 DSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFT 131
D LGL L C E ++ + D+ C +A DT L T
Sbjct: 283 DLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLT 328
>03_01_0603 + 4445977-4446882
Length = 301
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 79 IPKDQALDSLGLTLSGCEQESSNAEL-VARVKDLDPMCAKAVY 120
+P+DQ D L L+ + A +A +D DP CAK V+
Sbjct: 98 LPQDQLRDLLAGALAAHPEAGRAARADLAAARDRDPACAKMVH 140
>11_06_0702 + 26432798-26432890,26434021-26434416
Length = 162
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 73 AKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDL 111
A EDAG+P D DS G L G E++S + + +L
Sbjct: 123 AGEDAGVPGDWGHDSRG-KLGGIEEDSMGIKTPESILEL 160
>02_02_0211 +
7898434-7898574,7898759-7899349,7899575-7899821,
7900020-7900118,7900158-7900321,7900371-7900870,
7901007-7901256,7901461-7901549,7901823-7902064,
7902175-7902479,7902798-7902906,7903150-7903313
Length = 966
Score = 27.1 bits (57), Expect = 5.9
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 62 CANRIISMLHEAKEDAGIPK----------DQALDSLGLTLSGCEQESSNAELVARVKDL 111
C++ I+ L E K+D G P DQAL LG +S ++ SN +L V L
Sbjct: 444 CSDLILHKLAEKKKDPGCPTITCSIGAQQFDQALCDLGANVSIMPKDVSN-KLNFTVLSL 502
Query: 112 DPMC 115
P+C
Sbjct: 503 TPIC 506
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 26.6 bits (56), Expect = 7.9
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 84 ALDSLGLTLSGCEQESSNAELVARVKDL--DPMCAKAVYAASDTAGSLFTGAPDGGMVL 140
A+ G+T G + S L R +D DP ++A +D G L TG P G +
Sbjct: 90 AVKLAGITSVGVRGDDSVYVLTHRKEDKLHDPTTITNLFAITDRIGLLATGMPGDGRAI 148
>07_03_0088 + 13270463-13270745,13271113-13271584,13271680-13272484
Length = 519
Score = 26.6 bits (56), Expect = 7.9
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 55 WTLG--IDGCANRIISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLD 112
W+L + G II H K+ AG D LGL L C E + + ++
Sbjct: 263 WSLDKKVRGMLMDIIKTRHANKDVAGYGNDL----LGLMLEACAPEHGESCPQLSMDEII 318
Query: 113 PMCAKAVYAASDTAGSLFT 131
C +A DT L T
Sbjct: 319 DECKTFFFAGHDTTSHLLT 337
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 26.6 bits (56), Expect = 7.9
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 56 TLGIDGCANRIISMLHEAKEDAGIPKDQALDSLGLTLSGCEQ 97
TL G R + + AKE AG+PK Q D L L L C++
Sbjct: 311 TLPSPGEMLRAVEEYNRAKEAAGLPKRQTHD-LFLDLEYCDE 351
>01_01_0822 -
6401993-6402133,6402542-6402708,6402865-6402966,
6403437-6403577,6403685-6403768,6403858-6404164,
6404286-6404357
Length = 337
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 79 IPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGM 138
I KD D++ ++G S E VA K+L V A AGS+ AP+
Sbjct: 64 ILKDSFYDNV---ITGSSATSVRMEFVASNKELSSPSTSTVTAEDSFAGSVVADAPETES 120
Query: 139 VL 140
+L
Sbjct: 121 IL 122
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,280,832
Number of Sequences: 37544
Number of extensions: 164279
Number of successful extensions: 447
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 443
Number of HSP's gapped (non-prelim): 16
length of query: 144
length of database: 14,793,348
effective HSP length: 75
effective length of query: 69
effective length of database: 11,977,548
effective search space: 826450812
effective search space used: 826450812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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