GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002317-TA|BGIBMGA002317-PA|IPR002731|ATPase,
BadF/BadG/BcrA/BcrD type
         (144 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.18 
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           24   2.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   6.9  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 27.5 bits (58), Expect = 0.18
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 33   NLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPKDQALDSLGLTL 92
            +L + +EA   VG+A+ L +N     +D     +  ++ E      I  + +LD L   L
Sbjct: 1500 DLNLTNEAKEKVGQAQ-LNSNEAKSQVDKAMREVSLIMSELANLREIDVN-SLDDLERRL 1557

Query: 93   SGCEQESSNAELVARVKDL 111
            S  E+E  +A+L  R+  L
Sbjct: 1558 SAAEKELEDAQLTKRLSSL 1576


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 100 SNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLIAGE 144
           SN E + ++   +   A AVY A     SL+      G+VL +G+
Sbjct: 115 SNREKMTQIM-FETFAAPAVYVAIQAVLSLYASGRTTGVVLDSGD 158


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 7   LIPALNNKPTSRIRWEILV 25
           L+P L  K TS+IR E ++
Sbjct: 441 LVPLLKGKRTSKIRPEFVI 459


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,477
Number of Sequences: 2123
Number of extensions: 5064
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 144
length of database: 516,269
effective HSP length: 58
effective length of query: 86
effective length of database: 393,135
effective search space: 33809610
effective search space used: 33809610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)