GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002317-TA|BGIBMGA002317-PA|IPR002731|ATPase,
BadF/BadG/BcrA/BcrD type
         (144 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069061-1|AAL39206.1|  348|Drosophila melanogaster GH07590p pro...   140   9e-34
AE014297-2014|AAF55174.1|  348|Drosophila melanogaster CG6218-PA...   140   9e-34
BT016121-1|AAV37006.1| 2142|Drosophila melanogaster LD03265p pro...    29   3.2  
AE014296-2600|AAF49564.4| 2142|Drosophila melanogaster CG5931-PA...    29   3.2  
AY051924-1|AAK93348.1|  678|Drosophila melanogaster LD40883p pro...    28   4.3  
AE014297-3733|AAF56411.2|  678|Drosophila melanogaster CG11849-P...    28   4.3  
AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p pro...    28   5.6  
AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA...    28   5.6  
AE014134-1234|ABI31296.1|  763|Drosophila melanogaster CG13778-P...    27   9.8  
AE014134-1233|AAF52480.3|  763|Drosophila melanogaster CG13778-P...    27   9.8  
AB040816-1|BAA94341.1|  751|Drosophila melanogaster menin protein.     27   9.8  

>AY069061-1|AAL39206.1|  348|Drosophila melanogaster GH07590p
           protein.
          Length = 348

 Score =  140 bits (338), Expect = 9e-34
 Identities = 66/116 (56%), Positives = 83/116 (71%)

Query: 28  GATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPKDQALDS 87
           GATHS LVICDE+G+ VG   GLGTNHW +GI  CA RI  M+  AKE+AGIPK+  L S
Sbjct: 10  GATHSRLVICDESGQSVGATSGLGTNHWGIGIPECARRIADMVERAKEEAGIPKETPLTS 69

Query: 88  LGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLIAG 143
           LGL+LSGCEQE++N EL   ++   P  A+    +SDT GS++T +  GGMVLI+G
Sbjct: 70  LGLSLSGCEQEATNRELEQELRTTFPGLAQNYAVSSDTMGSMYTASSIGGMVLISG 125


>AE014297-2014|AAF55174.1|  348|Drosophila melanogaster CG6218-PA
           protein.
          Length = 348

 Score =  140 bits (338), Expect = 9e-34
 Identities = 66/116 (56%), Positives = 83/116 (71%)

Query: 28  GATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPKDQALDS 87
           GATHS LVICDE+G+ VG   GLGTNHW +GI  CA RI  M+  AKE+AGIPK+  L S
Sbjct: 10  GATHSRLVICDESGQSVGATSGLGTNHWGIGIPECARRIADMVERAKEEAGIPKETPLTS 69

Query: 88  LGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLIAG 143
           LGL+LSGCEQE++N EL   ++   P  A+    +SDT GS++T +  GGMVLI+G
Sbjct: 70  LGLSLSGCEQEATNRELEQELRTTFPGLAQNYAVSSDTMGSMYTASSIGGMVLISG 125


>BT016121-1|AAV37006.1| 2142|Drosophila melanogaster LD03265p protein.
          Length = 2142

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 67   ISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTA 126
            +S  H    +  +P  + LD   L +S   Q    +    R    +P+  +   A  ++ 
Sbjct: 1284 VSFRHLILPEKNMPPTELLDLQPLPISALRQPKFESFYSQRFPQFNPIQTQVFNAVYNSD 1343

Query: 127  GSLFTGAPDG-GMVLIA 142
             ++F GAP G G + IA
Sbjct: 1344 ENVFVGAPTGSGKMTIA 1360


>AE014296-2600|AAF49564.4| 2142|Drosophila melanogaster CG5931-PA
            protein.
          Length = 2142

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 67   ISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTA 126
            +S  H    +  +P  + LD   L +S   Q    +    R    +P+  +   A  ++ 
Sbjct: 1284 VSFRHLILPEKNMPPTELLDLQPLPISALRQPKFESFYSQRFPQFNPIQTQVFNAVYNSD 1343

Query: 127  GSLFTGAPDG-GMVLIA 142
             ++F GAP G G + IA
Sbjct: 1344 ENVFVGAPTGSGKMTIA 1360


>AY051924-1|AAK93348.1|  678|Drosophila melanogaster LD40883p
           protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 67  ISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTA 126
           I  +H+ +  A + +D  +     TL G  +       ++R    D +CA A+    D  
Sbjct: 25  IQRIHDGESKASVARDIGVPES--TLRGWCKNEDKLRFMSRQSATDNLCADALGDKMDGG 82

Query: 127 GSLFTGAPDGGMV 139
           G    GA  GG++
Sbjct: 83  GGGGGGAGGGGLL 95


>AE014297-3733|AAF56411.2|  678|Drosophila melanogaster CG11849-PA
           protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 67  ISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTA 126
           I  +H+ +  A + +D  +     TL G  +       ++R    D +CA A+    D  
Sbjct: 25  IQRIHDGESKASVARDIGVPES--TLRGWCKNEDKLRFMSRQSATDNLCADALGDKMDGG 82

Query: 127 GSLFTGAPDGGMV 139
           G    GA  GG++
Sbjct: 83  GGGGGGAGGGGLL 95


>AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p
           protein.
          Length = 1150

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 99  SSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPD 135
           ++N  ++A+V  L+ +C K   A+ D+AG+   GA D
Sbjct: 811 TTNPGILAQVSKLNTVCIKQEDASEDSAGTPELGAQD 847


>AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA
           protein.
          Length = 1150

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 99  SSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPD 135
           ++N  ++A+V  L+ +C K   A+ D+AG+   GA D
Sbjct: 811 TTNPGILAQVSKLNTVCIKQEDASEDSAGTPELGAQD 847


>AE014134-1234|ABI31296.1|  763|Drosophila melanogaster CG13778-PC,
           isoform C protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 72  EAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAV 119
           EAKE       +A++     ++  E++S N+EL   + DL   C + +
Sbjct: 487 EAKESKEAAGSEAMEGNNNRMATKEEKSKNSELPTTLADLTAACGEKI 534


>AE014134-1233|AAF52480.3|  763|Drosophila melanogaster CG13778-PA,
           isoform A protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 72  EAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAV 119
           EAKE       +A++     ++  E++S N+EL   + DL   C + +
Sbjct: 487 EAKESKEAAGSEAMEGNNNRMATKEEKSKNSELPTTLADLTAACGEKI 534


>AB040816-1|BAA94341.1|  751|Drosophila melanogaster menin protein.
          Length = 751

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 72  EAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAV 119
           EAKE       +A++     ++  E++S N+EL   + DL   C + +
Sbjct: 475 EAKESKEAAGSEAMEGNNNRMATKEEKSKNSELPTTLADLTAACGEKI 522


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,716,534
Number of Sequences: 52641
Number of extensions: 248579
Number of successful extensions: 594
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 585
Number of HSP's gapped (non-prelim): 11
length of query: 144
length of database: 24,830,863
effective HSP length: 78
effective length of query: 66
effective length of database: 20,724,865
effective search space: 1367841090
effective search space used: 1367841090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)