GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002315-TA|BGIBMGA002315-PA|undefined
         (364 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.49 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.49 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   3.4  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   4.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   4.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   6.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   8.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 9/97 (9%)

Query: 247  FFGGKKTDPLNDVGCAVENGVDDKETNIYESNDP-MAN--MYDSVHVNNENVIANQSVKT 303
            F  G K    N+V    +N ++  + N+ + +D  M N   YD   +  E    N++ +T
Sbjct: 1138 FMEGSKATVKNNVE---DNYMEAPQDNVSQPSDEVMENSWFYDGPLIRGEVHYLNRNEET 1194

Query: 304  --KLPVEDYLDPVQINKDYLDVQYKQ-KDDSILGYIM 337
                 +E YL P++ +K  +  + K  +D  +  ++M
Sbjct: 1195 FWNELIEQYLHPIEDDKKKVSAELKDLRDKMVFTFLM 1231


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 9/97 (9%)

Query: 247  FFGGKKTDPLNDVGCAVENGVDDKETNIYESNDP-MAN--MYDSVHVNNENVIANQSVKT 303
            F  G K    N+V    +N ++  + N+ + +D  M N   YD   +  E    N++ +T
Sbjct: 1138 FMEGSKATVKNNVE---DNYMEAPQDNVSQPSDEVMENSWFYDGPLIRGEVHYLNRNEET 1194

Query: 304  --KLPVEDYLDPVQINKDYLDVQYKQ-KDDSILGYIM 337
                 +E YL P++ +K  +  + K  +D  +  ++M
Sbjct: 1195 FWNELIEQYLHPIEDDKKKVSAELKDLRDKMVFTFLM 1231


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 312 DPVQINKDYLDVQYKQKDDSILGY 335
           D  ++  D   V YK KDD  +GY
Sbjct: 305 DWTRVFDDQQKVPYKYKDDQWIGY 328


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 293 ENVIANQSVKTKLPVEDYLDPVQINKDYLD 322
           E +  +Q +KT  PV+  L+   + KD +D
Sbjct: 130 EELNNDQFLKTLKPVKKVLEDADMTKDQID 159


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 38  LEDLKRDPDKYLITNESIDEKSE 60
           LE  + DP + L+ NESI + S+
Sbjct: 263 LEKCRPDPPQNLVINESIIDLSQ 285


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 332 ILGYIMSIFENRFGM-KRGMCNIILAD 357
           +L YI  +F N FG  K+    +++A+
Sbjct: 227 VLNYIDEVFNNNFGYDKKQYIGVVVAN 253


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 301  VKTKLPVEDYLDPVQINKDYLDVQ 324
            VKT +  ++    V I+K+YL ++
Sbjct: 1301 VKTNITYDESTQEVHISKEYLQLE 1324


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 301  VKTKLPVEDYLDPVQINKDYLDVQ 324
            VKT +  ++    V I+K+YL ++
Sbjct: 1301 VKTNITYDESTQEVHISKEYLQLE 1324


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.134    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,227
Number of Sequences: 317
Number of extensions: 4243
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 8
length of query: 364
length of database: 114,650
effective HSP length: 58
effective length of query: 306
effective length of database: 96,264
effective search space: 29456784
effective search space used: 29456784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)