GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002315-TA|BGIBMGA002315-PA|undefined
         (364 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   1.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.1  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   5.4  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   7.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   7.2  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 80  ELVNVNNSIEDLLKKWVPVKSFLYRNQPKQIN--KAAPSYLPMKPVSPK 126
           EL   +  +ED    W  V  +  R +  Q    K  PSY PM  VSP+
Sbjct: 516 ELKQCDEFVEDSDDYWNCVIQYNTRAENHQTGTAKMGPSYDPMAVVSPR 564


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 199 YEDLNYNEIPENTK 212
           Y D+NY E P+N+K
Sbjct: 171 YVDINYVEYPQNSK 184


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 17/63 (26%), Positives = 29/63 (46%)

Query: 32  KKFIAFLEDLKRDPDKYLITNESIDEKSEAEMALIESQYQTVKKKGTEELVNVNNSIEDL 91
           +KFI   E+   D   Y  +N S    S+      + + QT+ +K ++ L N   S+E+ 
Sbjct: 128 QKFIFPQENNYNDNYFYSKSNGSNSSNSDVLFKQNKEEEQTINRKNSDYLDNQEVSMENT 187

Query: 92  LKK 94
             K
Sbjct: 188 ENK 190


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 21   IVKLWR---PQSNAKKFIAFLEDLKRDPDKYLITNESIDEKSEAEMALIESQYQTVKKKG 77
            ++  WR   P+SNA   +     +   P+  L  +E +D+K + +   ++ +Y   K  G
Sbjct: 1224 LLGFWRVEMPRSNADYEVCIGSQIMVSPETLLSYDEKMDQKPKMDFN-VDIRYG--KNCG 1280

Query: 78   TEELVNVNNSI 88
              E +++N  +
Sbjct: 1281 KGERIDMNGKL 1291


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 196 DHLYEDLNYNEIPENTKNFVRDDRISSCNLNQTSKPCMVKIQELI 240
           D +  D+    + EN++  ++   +S+C L     P  V I+EL+
Sbjct: 194 DLVETDMTAQWLKENSRLALKPKDVSNCVLFALQTPDNVLIKELV 238


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 270 KETNIYESNDPMANMYD-SVHVNNEN 294
           KE  I  +N+P++N Y+ + + NN N
Sbjct: 77  KEPKIISNNNPLSNNYNYNNNYNNYN 102


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 195 EDHLYEDLNYNEIPENTKNFVRDDRISSCNLN 226
           +D  ++D+N+  +  N K  +R+    + N N
Sbjct: 389 DDFNFDDVNFRILGANVKELIRNTHCVNNNQN 420


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.134    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,437
Number of Sequences: 429
Number of extensions: 6023
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 7
length of query: 364
length of database: 140,377
effective HSP length: 59
effective length of query: 305
effective length of database: 115,066
effective search space: 35095130
effective search space used: 35095130
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)