GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002314-TA|BGIBMGA002314-PA|IPR006616|Protein of unknown
function DM9
         (248 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107742-1|AAI07743.1|  372|Homo sapiens IFT74 protein protein.        31   5.0  
AY040325-1|AAK77221.1|  600|Homo sapiens capillary morphogenesis...    31   5.0  
AL356133-4|CAH72643.1|  600|Homo sapiens intraflagellar transpor...    31   5.0  

>BC107742-1|AAI07743.1|  372|Homo sapiens IFT74 protein protein.
          Length = 372

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 191 GAVLGGRTASGETLYVGRARYQLSVTPGKVHPSHKTCYIGFGG 233
           G  L GR  SG     G  R   ++ PG   P  + C IG GG
Sbjct: 17  GVGLTGRPPSGIRPLSGNIRVATAMPPGTARPGSRGCPIGTGG 59


>AY040325-1|AAK77221.1|  600|Homo sapiens capillary morphogenesis
           protein-1 protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 191 GAVLGGRTASGETLYVGRARYQLSVTPGKVHPSHKTCYIGFGG 233
           G  L GR  SG     G  R   ++ PG   P  + C IG GG
Sbjct: 17  GVGLTGRPPSGIRPLSGNIRVATAMPPGTARPGSRGCPIGTGG 59


>AL356133-4|CAH72643.1|  600|Homo sapiens intraflagellar transport
           74 homolog (Chlamydomonas) protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 191 GAVLGGRTASGETLYVGRARYQLSVTPGKVHPSHKTCYIGFGG 233
           G  L GR  SG     G  R   ++ PG   P  + C IG GG
Sbjct: 17  GVGLTGRPPSGIRPLSGNIRVATAMPPGTARPGSRGCPIGTGG 59


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.134    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,748,229
Number of Sequences: 224733
Number of extensions: 1304439
Number of successful extensions: 2520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2517
Number of HSP's gapped (non-prelim): 3
length of query: 248
length of database: 73,234,838
effective HSP length: 88
effective length of query: 160
effective length of database: 53,458,334
effective search space: 8553333440
effective search space used: 8553333440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)