GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002312-TA|BGIBMGA002312-PA|undefined
         (276 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         27   0.77 
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         27   0.77 
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         27   0.77 
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         27   0.77 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.77 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   4.1  

>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 137 IDSRRRQLDAAVQGLGTHGLTADSSGTLISLHVAMKNELQRHVEVYKQALHKLEEL-SPV 195
           I   RRQLD A++ L T G TA +    IS H+   N+  +   + ++A    +   +  
Sbjct: 9   IQDARRQLDNAIELLQTEGNTALARAKDISGHLG--NQTNQISGISREARQYADRFKAEA 66

Query: 196 TVNQDPASSSHQR 208
             N   A  +H++
Sbjct: 67  DANMKQAQEAHKK 79


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 137 IDSRRRQLDAAVQGLGTHGLTADSSGTLISLHVAMKNELQRHVEVYKQALHKLEEL-SPV 195
           I   RRQLD A++ L T G TA +    IS H+   N+  +   + ++A    +   +  
Sbjct: 9   IQDARRQLDNAIELLQTEGNTALARAKDISGHLG--NQTNQISGISREARQYADRFKAEA 66

Query: 196 TVNQDPASSSHQR 208
             N   A  +H++
Sbjct: 67  DANMKQAQEAHKK 79


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 137 IDSRRRQLDAAVQGLGTHGLTADSSGTLISLHVAMKNELQRHVEVYKQALHKLEEL-SPV 195
           I   RRQLD A++ L T G TA +    IS H+   N+  +   + ++A    +   +  
Sbjct: 9   IQDARRQLDNAIELLQTEGNTALARAKDISGHLG--NQTNQISGISREARQYADRFKAEA 66

Query: 196 TVNQDPASSSHQR 208
             N   A  +H++
Sbjct: 67  DANMKQAQEAHKK 79


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 137 IDSRRRQLDAAVQGLGTHGLTADSSGTLISLHVAMKNELQRHVEVYKQALHKLEEL-SPV 195
           I   RRQLD A++ L T G TA +    IS H+   N+  +   + ++A    +   +  
Sbjct: 9   IQDARRQLDNAIELLQTEGNTALARAKDISGHLG--NQTNQISGISREARQYADRFKAEA 66

Query: 196 TVNQDPASSSHQR 208
             N   A  +H++
Sbjct: 67  DANMKQAQEAHKK 79


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 137  IDSRRRQLDAAVQGLGTHGLTADSSGTLISLHVAMKNELQRHVEVYKQALHKLEEL-SPV 195
            I   RRQLD A++ L T G TA +    IS H+   N+  +   + ++A    +   +  
Sbjct: 1148 IQDARRQLDNAIELLQTEGNTALARAKDISGHLG--NQTNQISGISREARQYADRFKAEA 1205

Query: 196  TVNQDPASSSHQR 208
              N   A  +H++
Sbjct: 1206 DANMKQAQEAHKK 1218


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 108  GGDQGSGLRARTSRLASALVHYAPDSRDAIDSRRRQLDAAVQGLGTHGLTADSSGT 163
            GG+ G+    R  R+AS       D  D+  S+RR    +  G G+   +   SG+
Sbjct: 1037 GGESGAPATKRKRRIAS-------DEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS 1085


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,394
Number of Sequences: 2123
Number of extensions: 8822
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 6
length of query: 276
length of database: 516,269
effective HSP length: 63
effective length of query: 213
effective length of database: 382,520
effective search space: 81476760
effective search space used: 81476760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)