GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002311-TA|BGIBMGA002311-PA|IPR001424|Superoxide
dismutase, copper/zinc binding, IPR008388|ATPase, V1 complex, subunit
S1
         (1471 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    36   0.006
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       29   0.90 
AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.    29   1.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    28   1.6  
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           28   2.1  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    27   3.6  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    26   8.4  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    26   8.4  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 753 LGDLGLKYGLIDEAKSFKSFYNETQVSLFGPYSILGRSVVLHKKSRD 799
           +GDLG      DE    K+ Y++T VSL+G  S++GR++V+H +  D
Sbjct: 100 VGDLGNIAA--DENGIAKTSYSDTVVSLYGARSVIGRAIVIHAEVDD 144



 Score = 27.1 bits (57), Expect = 3.6
 Identities = 9/31 (29%), Positives = 22/31 (70%)

Query: 607 DSDRLTRRLFTDTVISLTGKHSIMRKSLLIY 637
           D + + +  ++DTV+SL G  S++ ++++I+
Sbjct: 109 DENGIAKTSYSDTVVSLYGARSVIGRAIVIH 139


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 0.90
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 913 HDLYSQECGIDNPLRCDVGDLTARLGTINI 942
           H  +   CGI+ PL     D T RLG IN+
Sbjct: 226 HGAWDSYCGINAPLYRGSADTTDRLGQINV 255


>AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein
          protein.
          Length = 128

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 38 SHKNDTLISIRTNLKPTLQYPDG--VWRWTIHEFPVDYRDISESRCSEETLGREIIDLTE 95
          S  N TL+     L PT    D   V     H+  + Y DI+ +R  +E LGR++  L +
Sbjct: 33 STTNRTLLCWAIKLSPTAYVTDAECVRSHRKHQIVMIYGDIAPNRTVQERLGRKVAGLRQ 92


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 218 YEDNCNVLQAVFDPENNGEGMSVGDL---DSRLGLIKVATDAK-VKKVRTLYKNDVIDIL 273
           Y   C          N  EG+ VGD+   ++ + L+K  TD +  ++V  +Y   + + L
Sbjct: 426 YYSRCRNTNGALQQTNRCEGLKVGDVVTFEAHITLLKCPTDPRDWQQVLQIYPVGINESL 485

Query: 274 KNDMEM 279
             D+EM
Sbjct: 486 TVDIEM 491


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 754 GDLGLKYGLIDEAKSFKSFYNETQVSLFGPYSILGRSVVLHKKSRD 799
           GD+G    + DE    K     TQ++L G  +++GRS+V+H    D
Sbjct: 3   GDMGNI--VADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDD 46


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 236 EGMSVGDLDSRLGLIKVATDAKVKKVRTLYKNDVIDILKNDMEMT 280
           E M V  LD+R G++K     + KK+  L +N      K D+EM+
Sbjct: 212 ETMGVLALDTRFGVLKDEQTEEAKKILGLVRNIFELTYKLDVEMS 256


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
          protein AgamOBP50 protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 56 QYPDGVWRWTIHEFPVDYRDI 76
          +YPD +W+ T+  F   YR++
Sbjct: 50 KYPDALWQGTVCAFDCTYREM 70


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 56  QYPDGVWRWTIHEFPVDYRDI 76
           +YPD +W+ T+  F   YR++
Sbjct: 199 KYPDALWQGTVCAFDCTYREM 219


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.137    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,613,052
Number of Sequences: 2123
Number of extensions: 70079
Number of successful extensions: 125
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 118
Number of HSP's gapped (non-prelim): 9
length of query: 1471
length of database: 516,269
effective HSP length: 73
effective length of query: 1398
effective length of database: 361,290
effective search space: 505083420
effective search space used: 505083420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)